YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|11348112

General Information:
Name(s) found: gi|11348112 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • pir||E83156 conserved hypothetical protein PA3919 [imported] - Pseudomonas aeruginosa (strain PAO1) [NCBI NR]
    • Organism: Pseudomonas aeruginosa
    Length: 463 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDHGRSRPT QPTLYVLDTN VLIHDPNALL NFQEHRVAIP MTVLEELDKL KTGKHTIAAE  60
   61 CRQAIRLIDQ VLGEATPEQV EGGVPIQRGK NGPSGSLSIL MSKRAEPITW LPEHLNDNKI 120
  121 INQLVELKSR HSGVRVVLVT KDINMRLKAR ACGVDAEDYH TDQLIDDVAL LSRGYHSLAG 180
  181 SFWDRVSKVE TRQDHGRTWH RVQLTDNLPA VHINEFIVDE QGFVGWIKGI QQDELTILDL 240
  241 HQEPLLHQEA WGLRPRDVYQ SLALYALLDP DIHLVNLSGA AGSGKTILAL AAAIEQTMVS 300
  301 KRYRRIIATR SVQGLDEDIG FLPGTEAEKM EPWLGAITDN LEALHMDDEC THGSVDYILS 360
  361 KVPLQFKSLN YIRGRSFQQS LILIDECQNL TPHQMKTIIT RAGSGSKVIC LGNLAQIDTP 420
  421 YLSATSSGLT YLTERFKDFP HGVHVTLQGV PRSVLAEYAE AHM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] PSI-BLAST 7.39794 No description for 2dokA was found.
    2 View Details [174..463] PSI-BLAST 25.154902 RecBCD:DNA complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.51994251520164 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.99771155133571 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.99645011792575 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.975793726871634 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.974850635687898 bayes_pls_golite062009
  • hydrolase activity
    		•  0.950467888620299 bayes_pls_golite062009
  • catalytic activity
    		•  0.458437698837681 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.26761549928574 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.264809267091232 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.26459719047586 bayes_pls_golite062009
  • nucleotide binding
    		•  0.258849546636602 bayes_pls_golite062009
  • ATP binding
    		•  0.164254028163089 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.142702520773108 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.134419547865173 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle