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Protein Overview: RNJ_HELPY

General Information:
Name(s) found: RNJ_HELPY [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Ribonuclease J OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=rnj PE=1 SV=1 [Swiss-Prot]
    • Organism: Helicobacter pylori 26695
    Length: 689 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDNNQNNEN HENSSENSKA DEMRAGAFER FTNRKKRFRE NAQKNAEYSN HEASSHHKKE  60
   61 HRPNKKPNNH HKQKHAKTRN YAQEELDSNK VEGVTEILHV NERGTLGFHK ELKKGVEANN 120
  121 KIQVEHLNPH YKMNLNSKAS VKITPLGGLG EIGGNMMVIE TPKSAIVIDA GMSFPKEGLF 180
  181 GVDILIPDFS YLHQIKDKIA GIIITHAHED HIGATPYLFK ELQFPLYGTP LSLGLIGSKF 240
  241 DEHGLKKYRS YFKIVEKRCP ISVGEFIIEW IHITHSIIDS SALAIQTKAG TIIHTGDFKI 300
  301 DHTPVDNLPT DLYRLAHYGE KGVMLLLSDS TNSHKSGTTP SESTIAPAFD TLFKEAQGRV 360
  361 IMSTFSSNIH RVYQAIQYGI KYNRKIAVIG RSMEKNLDIA RELGYIHLPY QSFIEANEVA 420
  421 KYPDNEILIV TTGSQGETMS ALYRMATDEH RHISIKPNDL VIISAKAIPG NEASVSAVLN 480
  481 FLIKKEAKVA YQEFDNIHVS GHAAQEEQKL MLRLIKPKFF LPVHGEYNHV ARHKQTAISC 540
  541 GVPEKNIYLM EDGDQVEVGP AFIKKVGTIK SGKSYVDNQS NLSIDTSIVQ QREEVASAGV 600
  601 FVATIFVNKN KQALLESSQF SSLGLVGFKD EKPLIKEIQG GLEVLLKSSN AEILNNPKKL 660
  661 EDHTRNFIRK ALFKKFRKYP AIICHAHSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] MSA 1.080995 View MSA. No confident structure predictions are available.
    2 View Details [140..561] PSI-BLAST 56.69897 No description for 2i7tA was found.
    3 View Details [562..689] MSA 3.138988 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle