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Protein Overview: gi|34395075, gi|...

General Information:
Name(s) found: gi|50933973 [NCBI NR]
gi|34395075 [NCBI NR]
gi|255677483 [NCBI NR]
gi|125599004 [NCBI NR]
Description(s) found:
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  • gi|50933973|ref|XP_476514.1| putative receptor kinase Lecrk [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|34395075|dbj|BAC84737.1| putative receptor kinase Lecrk [Oryza sativa Japonica Group] [NCBI NR]
  • gi|255677483|dbj|BAF20736.2| Os07g0130300 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125599004|gb|EAZ38580.1| hypothetical protein OsJ_22968 [Oryza sativa Japonica Group] [NCBI NR]
  • putative receptor kinase Lecrk [Oryza sativa (japonica cultivar-group)]gi|34395075|dbj|BAC84737.1| putative receptor kinase Lecrk [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • putative receptor kinase Lecrk [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 671 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIALSFLLH ILLFHGFNLV LAVSASDDQF VFSGFSGANV TLDGTATVTA GGLLELTNGT  60
   61 TQLKGHAFFP APLSFRGSLN GTVQSFSASF VFAILTSYPN LSCHGIAFVV APSNNLSTAL 120
  121 AAQYMGLTNI DNNGNASNHI FAAEIDTMQN VEFQDINNNH IGVDINGLHS VESHYAGYYD 180
  181 KNGSFHNMNL ISGDVMQAWV DYDGDIAQIN ITIGPIDMSK PGRSLISTTY NLSDVLMEPS 240
  241 FIGFSSATGP INSRHYILGW SFGMNKPAPN IDIAKLPKLP RLAPKPQSKV LVILLPIAIA 300
  301 AFILSVGIAM VFLVRRRQRY AELREDWEDE FGPHRFAYKD LLHATDGFSD KHILGAGGFG 360
  361 RVYKGILPKS KLEVAVKRVS HESRQGMKEF VAEVASIGRI RHRNLVQLLG YCRRKGELLL 420
  421 VYDYMSNGSL DRYLHYEGNK PVLDWVQKFQ IIKDVASGLL YLHEKWDKVV IHRDIKASNV 480
  481 LLDKEMNARL GDFGLARLYD HGTDAHTTHM VGTMGYLAPE LIHTGKASTL TDVFAFGTFL 540
  541 LEVICGQRPI KEDAHGNQIL LVDWVLEHWH NESLLDTVDP RLQGDYNVEE ACLVLKLGLL 600
  601 CSHPSTNARP CMQQVVDYLE GDTPVPELAS THRNFNELAS MRKKGFDPYI MSYNPSSTVS 660
  661 FGTVSDLSGG R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] PSI-BLAST 6.09691 Phytohemagglutinin-L, PHA-L, also arcelin
    2 View Details [178..331] FFAS03 4.46 Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation
    3 View Details [332..671] PSI-BLAST 70.0 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.40096962515027 bayes_pls_golite062009
  • protein binding
    		•  1.80794638640093 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.67818953913801 bayes_pls_golite062009
  • kinase activity
    		•  1.67164937001078 bayes_pls_golite062009
  • fibroblast growth factor binding
    		•  1.5757435501069 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.57319468996942 bayes_pls_golite062009
  • protein kinase activity
    		•  1.4419983524192 bayes_pls_golite062009
  • transferase activity
    		•  1.33812952885475 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.26174167673763 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • signal transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • actin binding
    		•  0.64509193674198 bayes_pls_golite062009
  • structural molecule activity
    		•  0.591248843231149 bayes_pls_golite062009
  • hydrolase activity
    		•  0.488963797364099 bayes_pls_golite062009
  • receptor activity
    		•  0.376562682962271 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.372701974560119 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.339759264844777 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.213382263378401 bayes_pls_golite062009
  • DNA binding
    		•  0.157628282318248 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle