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Protein Overview: HFA2B_ORYSJ

General Information:
Name(s) found: HFA2B_ORYSJ [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDPMLNAVK EEESHGDGGG LEVVAGEDGA AAVAAGVAPR PMEGLHDAGP PPFLTKTYDM  60
   61 VDDAGTDAAV SWSATSNSFV VWDPHAFATV LLPRFFKHNN FSSFVRQLNT YGFRKVDPDR 120
  121 WEFANENFLR GQRHLLKNIK RRKPPSHTAS NQQSLGPYLE VGHFGYDAEI DRLKRDKQLL 180
  181 MAEVVKLRQE QQNTKANLKA MEDRLQGTEQ RQQQMMAFLA RVMKNPEFLK QLMSQNEMRK 240
  241 ELQDAISKKR RRRIDQGPEV DDVGTSSSIE QESPALFDPQ ESVEFLIDGI PSDLENSAMD 300
  301 AGGLVEPQDF DVGASEQQQI GPQGELNDNF WEELLNEGLV GEENDNPVVE DDMNVLSEKM 360
  361 GYLNSNGPTA GE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 32.09691 SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR
    2 View Details [132..372] FFAS03 1.34 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle