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Protein Overview: gi|148921418, gi...

General Information:
Name(s) found: gi|50916531 [NCBI NR]
gi|41469085 [NCBI NR]
gi|215765677 [NCBI NR]
gi|148921418 [NCBI NR]
gi|115453515 [NCBI NR]
gi|113548829 [NCBI NR]
gi|108708790 [NCBI NR]
Description(s) found:
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  • gi|50916531|ref|XP_468662.1| putative DNA binding transcription factor [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|41469085|gb|AAS07059.1| putative DNA binding transcription factor [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215765677|dbj|BAG87374.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|148921418|dbj|BAF64448.1| HAP3 subunit of HAP complex [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115453515|ref|NP_001050358.1| Os03g0413000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113548829|dbj|BAF12272.1| Os03g0413000 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108708790|gb|ABF96585.1| CCAAT-binding transcription factor subunit A, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • putative DNA binding transcription factor [Oryza sativa (japonica cultivar-group)]gi|41469085|gb|AAS07059.1| putative DNA binding transcription factor [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os03g0413000 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative DNA binding transcription factor [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • CCAAT-binding transcription factor subunit A, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDSDNDSGG PSNYAGGELS SPREQDRFLP IANVSRIMKK ALPANAKISK DAKETVQECV  60
   61 SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEDY VDPLKHYLHK FREIEGERAA 120
  121 ASTTGAGTSA ASTTPPQQQH TANAAGGYAG YAAPGAGPGG MMMMMGQPMY GSPPPPPQQQ 180
  181 QQQHHHMAMG GRGGFGHHPG GGGGGSSSSS GHGRQNRGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 32.154902 Nuclear transcription factor Y subunit beta (Nf-Yb3)
    2 View Details [127..219] PSI-BLAST 4.30103 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.581886805340955 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle