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Protein Overview: gi|49388233, gi|...

General Information:
Name(s) found: gi|50911074 [NCBI NR]
gi|49388233 [NCBI NR]
gi|215697196 [NCBI NR]
gi|115447523 [NCBI NR]
gi|113537072 [NCBI NR]
Description(s) found:
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  • gi|50911074|ref|XP_466970.1| PRLI-interacting factor N-like [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|49388233|dbj|BAD25353.1| PRLI-interacting factor N-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215697196|dbj|BAG91190.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115447523|ref|NP_001047541.1| Os02g0639700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113537072|dbj|BAF09455.1| Os02g0639700 [Oryza sativa Japonica Group] [NCBI NR]
  • PRLI-interacting factor N-like [Oryza sativa (japonica cultivar-group)]gi|49388233|dbj|BAD25353.1| PRLI-interacting factor N-like [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os02g0639700 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • PRLI-interacting factor N-like [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLRHSQTPS SDDETRALNA LLDAFSSAFS LDDIATAYCR ANGDVNRAGD LLTELEHPMA  60
   61 KSNEVDSSVG TIHPPSGKAI EENSTESSGQ AKSREKMQKS SASFGTVSSM LGKGSTRATV 120
  121 PLMNRASGKE KPPMVELPEY MRDDFNGKVD KSDSAPKRET LNNRDIEEFL FSMLGEGFKL 180
  181 SMDMIREVLG SCGYDIKKSM EELMSVSTKD TSKKAEDKHY IAQDAAVECS STKGSCLESQ 240
  241 STFRNGSAYS LRGKRHSSSQ ISPGELLVSI FTVPERSEEE PIGKRYELGA NRNRVPDQKP 300
  301 VVEPLEDISS ETNCYPVKVI LSKELVAHNE EDYQNYRRAA KQHWDMMKQY YEKAVDAFRE 360
  361 GNQKEVEYLL GEGKHYYMMA RLADEKSSAE IVKSKKVESK NELCLDLRGQ DPANVANLVR 420
  421 LHLRQLSNIP SFEYLKVITG AEDGSFKSAQ RRRKVMKYLE KKSIVWTEEE SNPGTILIPI 480
  481 NQKQDQQD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..237] deduced N/A No confident structure predictions are available.
    2 View Details [238..314] deduced N/A No confident structure predictions are available.
    3 View Details [315..398] Pfam 16.275724 No description for PF08590.1 was found. Confident ab initio structure predictions are available.
    4 View Details [399..488] PSI-BLAST 21.30103 No description for 2d9iA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle