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Protein Overview: gi|38343986, gi|...

General Information:
Name(s) found: gi|50922621 [NCBI NR]
gi|38343994 [NCBI NR]
gi|38343986 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|50922621|ref|XP_471671.1| OSJNBa0041M21.10 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38343986|emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 2074 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEDEVSLEE MEEYNLVASK LFRSEEDGYK FYNEYARCKG FSIRRDKVKR FSGYRTLKNF  60
   61 ERTNRKREPR ALTHCGCKAM LEIELNGETG MWFVSGFEAR HSHRLANPDL VAFLRSHREV 120
  121 NDAQKAEAVE LGVGGLRTCQ IITYHVNRYS LPFVPFVGAN HHRSTIIFGC GILSNESVSS 180
  181 YVWLLQTLLE AMHQKHPKSL ITDGDASMAK AITKVMPNTD HRLCSWHIEE NMKCHLRRQK 240
  241 LADFKKFLYD AMDVDDFERC WVEYKAKYGF NENNLWISMM YELRKKWSTA YMKGTRFLGM 300
  301 RSNQRSESLN SRLHRHLDRK MSLVDLVEHY EFCLSRIRRN EAVLDARASQ SVSFTTICAD 360
  361 PLEKSAARIY MPAMFKKVWA EIRKLYEWEV FNVARQDGAG VFTVASKDNN VVQVHVWCTF 420
  421 EEQSMNSANC DCKKLECDGI PCSHVCAVLK FLGVGTIPHC CVMTTQICSI HALYDLIATF 480
  481 SVPQREAVHK CGFGGLLKIH RINVHRILCM WIANQFDTKA EAFKIQGSYL SLTNRDAEHL 540
  541 LDLPSQGEEI FEPPQTKNRD LFDEFKTTSK QGAHIKLSLQ EYFQTNKGIH DDNFIHRFVL 600
  601 FVIGVFLCPT TQRYVSSAYL NLVEDVNAIS AINWTSLNLN HLMKSIKNIS TIKGVNLEGN 660
  661 LPLLRLWYWE KLRADNLDPT IDYTMRDKPL IQYWDKHKAK KRYKIDTTYD YAGADHGDSE 720
  721 RNHSERMPPK RVVKEKVVRR KESDAGPDMA AEEGAEPSAS VAEDREAQAP SQPPSDPAPS 780
  781 QPSSAPATSV QVPNTADVAK AAAAARALQT RAEILSTNQL VVPQAAPSQP TAPTALTVVQ 840
  841 AQISLDPEAQ AEADIEAMRQ NMTRLQDMLR QMQEQQQAYE TTRRTKATSA PILQYSAGYA 900
  901 PPQVQPQVVT QSSPPLAAQP PVYFAGQHQP PGQAPQSVAE GASALQAQLQ AFLQQLNQSH 960
  961 YISSTTPSAH PVGNTSQGAP NWLPPIQPGS GPSPSSQGPQ FDFVNTVQVP TVQQQVPTPG1020
 1021 FGTNQAPIQA AMMWSQPIFD PSMAAQQVQP VGAGQSNATA QLYAQAAISP FATPYPQQGA1080
 1081 VNRAGGEKGL PLSGGIKTRP IPPQFKFPPV PRYSGETDPK EFLSIYESAI EAAHGDENTK1140
 1141 AKVIHLALDG IARSWYFNLP ANSIYSWEQL RDVFVLNFRG TYEEPKTQQH LLGIRQRPGE1200
 1201 SIRENMRRFS QARCQVQDIT EASVINAASA GLLEDELTRK IVNKEPQTLE HPLRIIDGFA1260
 1261 RGEEDSKRRQ AIQAEYDKAS VAAAQAQAQV QIAEPPPLSV RQSQPAIQGQ PPRQGQAPMT1320
 1321 WRKFRTDRAG KAVMAVEEVQ ALRKEFDTQQ ASNHQQPARK KVRKDLYCAF HGRSSHTTEQ1380
 1381 CRNIRQRGNV QDPRPQQGTT VEAPREAVQE QTTPAKQRQD TQRRRKMQIR MVHSITSAGE1440
 1441 GAPQYVNQLI SFGPEDAEGV LFPHQDPLVI SAEIAGFEVR RILVDGGSSA DVIYAEAYAK1500
 1501 MGLPTQALTP ALTSLRGFSG EAVQVLGQAL LLIAFGSGEN RREEQILFDV VNIPYNYNAI1560
 1561 FGRATLNKLE AISHHNYLKL KMPGPTGVIV VKGLQPSAAS KCDLAIINRA VHNVKTEPHE1620
 1621 RPKHTPKPTP HGKVTKVQIN DADPTKLVSL GGDMGEEEVE SILEVLKKNI DIFAWSPDEV1680
 1681 GGVPADLIMH HLAVKPNIKP RKQKLRKMSA DRQEATKTEV QKLLRAGVIQ EIDHPEWLAN1740
 1741 PVLVRKSNGK WRMCVDFTDL NKACPKHDFP LPRIDQLVDL TAGCELMSFL DAYSGYHQIH1800
 1801 MNPLDIPKTS FITPFGTFCH LRMPFGLRNA GATFARLVYK VLGKQLGRNV EAYVDDIVVK1860
 1861 SRKAFDHAID LQETFDNLCV AGIKLNPEKC VFSVRVGKLL GFLVSETGIE ANPEKIDAIQ1920
 1921 QMKPPSSIHE VQKLAGRIAA LSRFLSKAVE RGLPFFKTLR DARKFNWTPE CQAAFDELKQ1980
 1981 HLQSPPVLIS PPRGSELLLY LAASPVAVSA ALVQKTESRQ KSVYFVSEAL QGAQTRYIEM2040
 2041 EKLAYALSRP EFLSKIPNAY MCVNPRPGIS RGTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] Pfam 21.124939 No description for PF03101.7 was found. No confident structure predictions are available.
    2 View Details [134..270] Pfam 32.677781 No description for PF10551.1 was found. No confident structure predictions are available.
    3 View Details [271..480] deduced N/A No confident structure predictions are available.
    4 View Details [481..659] deduced N/A No confident structure predictions are available.
    5 View Details [660..865] deduced N/A No confident structure predictions are available.
    6 View Details [866..1024] deduced N/A No confident structure predictions are available.
    7 View Details [1025..1126] deduced N/A No confident structure predictions are available.
    8 View Details [1127..1243] Pfam 28.744727 No description for PF03732.9 was found. No confident structure predictions are available.
    9 View Details [1244..1453] deduced N/A No confident structure predictions are available.
    10 View Details [1454..1673] PSI-BLAST 24.30103 CRYSTAL STRUCTURE OF A TETHERED DIMER OF HIV-1 PROTEASE COMPLEXED WITH AN INHIBITOR
    11 View Details [1674..2074] PSI-BLAST 123.0 No description for 3drsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle