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Protein Overview: gi|16504411, gi|...

General Information:
Name(s) found: gi|25305547 [NCBI NR]
gi|16504411 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|25305547|pir||AB0909 serine protease (EC 3.4.21.-) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) [NCBI NR]
  • gi|16504411|emb|CAD07864.1| serine protease [Salmonella enterica subsp. enterica serovar Typhi] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKHTQLLSA LALSVGLTLS APFPALASIP GQVPGQATLP SLAPMLEKVL PAVVSVKVEG  60
   61 TATQSQKVPE EFKKFFGEDL PDQPSQPFEG LGSGVIIDAA KGYVLTNNHV INQAQKISIQ 120
  121 LNDGREFDAK LIGGDDQSDI ALLQIQNPSK LTQIAIADSD KLRVGDFAVA VGNPFGLGQT 180
  181 ATSGIISALG RSGLNLEGLE NFIQTDASIN RGNSGGALLN LNGELIGINT AILAPGGGSI 240
  241 GIGFAIPSNM AQTLAQQLIQ FGEIKRGLLG IKGTEMTADI AKAFKLNVQR GAFVSEVLPN 300
  301 SGSAKAGVKS GDVIISLNGK PLNSFAELRS RIATTEPGTK VKLGLLRDGK PLEVEVTLDS 360
  361 NTSSSASAEM IAPALQGATL SDGQLKDGTK GVKVDSVEKS SPAAQAGLQK DDVIIGVNRD 420
  421 RISSIAEMRK VMAAKPSIIA LQVVRGNENI YLLLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..455] PSI-BLAST 84.154902 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  5.28251016030465 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.93232564230667 bayes_pls_golite062009
  • endopeptidase activity
    		•  4.76863192965644 bayes_pls_golite062009
  • hydrolase activity
    		•  4.7420645083083 bayes_pls_golite062009
  • serine hydrolase activity
    		•  3.40985043278892 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  3.40724860044542 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  3.13486560415684 bayes_pls_golite062009
  • catalytic activity
    		•  1.40927913545237 bayes_pls_golite062009
  • protein binding
    		•  0.0013332686405948 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle