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Protein Overview: gi|29144281, gi|...

General Information:
Name(s) found: gi|29144281 [NCBI NR]
gi|29139918 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|29144281|ref|NP_807623.1| peptidoglycan synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] [NCBI NR]
  • gi|29139918|gb|AAO71483.1| penicillin-binding protein 1A [Salmonella enterica subsp. enterica serovar Typhi Ty2] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. Ty2
    Length: 858 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLNGKSPVK FVKYLLILAV CCILLGAGSI YGLYRYIEPQ LPDVATLKDV RLQIPMQVYS  60
   61 ADGELIAQYG EKRRIPVTLD QIPPEMINAF IATEDSRFYE HHGIDPVGIF RAASVALFSG 120
  121 HASQGASTIT QQLARNFFLS PERTLMRKIK EAFLAIRIEQ LLNKNEILEL YLNKIYLGYR 180
  181 AYGVGAAAQV YFGKTVDQLS LSEMAVIAGL PKAPSTFNPL YSMDRAVARR NVVLSRMLSE 240
  241 GYITQAQYDQ ARSEPIDANY HAPEIAFSAP YLSEMVRQEM YNRYGESAYE DGYRIYTTIT 300
  301 RKVQQAAQQA VRNNVLDYDM RHGYSGPANV LWKVGETAWD SKKITDTLKA LPTYGPLLPA 360
  361 VVTSANPQEA TAALADGTSV SLHMEGMRWA RPYRSDTQQG PTPRKVTDVV QTGQQIWVRQ 420
  421 VDNDWWLAQV PEVNSALVSL NPQTGAVLAL VGGFDFNQSK FNRATQALRQ VGSNIKPFLY 480
  481 TAAMDKGLTL ASMLNDVPIS RWDAGAGSDW RPKNSPPQYA GPIRLRQGLG QSKNVVMVRA 540
  541 MRAMGVDYAA EYLQRFGFPA QNIVHTESLA LGSASFTPMQ VARGYAVMAN GGFLIDPYFI 600
  601 SKIENDQGGV IFEAKPKIAC TECDIPVIYG NTQKSDVLEN TNVEEVAVSQ EQQNSAVPMP 660
  661 ELEQANQALV AQNGTQEYAP HVINTPLAFL IKSALNTNIF GEPGWMGTGW RAARDLKRRD 720
  721 IGGKTGTTNS SKDAWFSGYG PGVVTSVWIG FDDHRRDLGR TTASGAIKDQ ISGYEGGAKS 780
  781 AQPAWDAYMK AVLEGVPEQP LTPPPGIVTV NIDRSTGQLA SGGNSREEYF IEGTQPTQQA 840
  841 VHEVGTTIID NGETHELF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..703] PSI-BLAST 102.0 No description for 2oluA was found.
    2 View Details [704..858] PSI-BLAST 42.0 PENICILLIN-BINDING PROTEIN 1A (PBP-1A) ACYL-ENZYME COMPLEX ( CEFOTAXIME) FROM STREPTOCOCCUS PNEUMONIAE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • drug binding
    		•  3.43867028493374 bayes_pls_golite062009
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.12650314537616 bayes_pls_golite062009
  • penicillin binding
    		•  2.89507018520983 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  2.70174066798582 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.69091897402517 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
    		•  2.14702453234629 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  1.96547160092829 bayes_pls_golite062009
  • catalytic activity
    		•  1.85492008367309 bayes_pls_golite062009
  • exopeptidase activity
    		•  1.44522375970439 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.11667329067303 bayes_pls_golite062009
  • binding
    		•  1.11566650386305 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80962743884654 bayes_pls_golite062009
  • peptidase activity
    		•  0.376767771035659 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.163657050466595 bayes_pls_golite062009
  • protein binding
    		•  0.0666688846338231 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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