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Protein Overview: YBED_ECO57

General Information:
Name(s) found: YBED_ECO57 [Swiss-Prot]
Description(s) found:
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  • gi|67476034|sp|P0A8J6.1|YBED_ECO57 RecName: Full=UPF0250 protein ybeD [NCBI NR]
  • gi|15829923|ref|NP_308696.1| hypothetical protein ECs0669 [Escherichia coli O157:H7] [NCBI NR]
  • gi|13360127|dbj|BAB34092.1| hypothetical protein [Escherichia coli O157:H7] [NCBI NR]
  • UPF0250 protein YbeD OS=Escherichia coli O157:H7 GN=ybeD PE=3 SV=1 [Swiss-Prot]
  • hypothetical protein b0631 [Escherichia coli K12]gi|15829923|ref|NP_308696.1| hypothetical protein ECs0669 [Escherichia coli O157:H7]gi|30062180|ref|NP_836351.1| hypothetical protein S0672 [Shigella flexneri 2a str. 2457T]gi|26246611|ref|NP_752651.1| H [nrdb_11152004_Chlamydomonas]
  • UPF0250 protein ybeD [nr-271106-contam.fasta]
  • UPF0250 protein ybeD OS=Escherichia coli O157:H7 GN=ybeD PE=3 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli O157:H7
    Length: 87 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKLNELLE FPTPFTYKVM GQALPELVDQ VVEVVQRHAP GDYTPTVKPS SKGNYHSVSI  60
   61 TINATHIEQV ETLYEELGKI DIVRMVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] PSI-BLAST 33.0 Solution structure of conserved protein YbeD from E. coli


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle