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Protein Overview: gi|218929055, gi...

General Information:
Name(s) found: gi|218929055 [NCBI NR]
gi|16122187 [NCBI NR]
gi|15979958 [NCBI NR]
gi|115347666 [NCBI NR]
Description(s) found:
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  • gi|218929055|ref|YP_002346930.1| hypothetical protein YPO1941 [Yersinia pestis CO92] [NCBI NR]
  • gi|16122187|ref|NP_405500.1| hypothetical protein YPO1941 [Yersinia pestis CO92] [NCBI NR]
  • gi|15979958|emb|CAC90756.1| putative membrane protein [Yersinia pestis CO92] [NCBI NR]
  • gi|115347666|emb|CAL20579.1| putative membrane protein [Yersinia pestis CO92] [NCBI NR]
  • putative membrane protein [Yersinia pestis CO92]gi|45441499|ref|NP_993038.1| putative membrane protein [Yersinia pestis biovar Medievalis str. 91001]gi|22126254|ref|NP_669677.1| putative integral membrane protein [Yersinia pestis KIM]gi|21959226|gb|AAM [nrdb_11152004_Chlamydomonas]
  • hypothetical protein YPO1941 [Yersinia pestis CO92] [nr-271106-contam.fasta]
  • putative membrane protein [Yersinia pestis CO92] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis CO92
    Length: 639 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIWQKFLLL FCCWVLSGPL VWASTDYSLW VNDIQSRLDK TAQLYQQQKT DEARAMVQMA  60
   61 YFEVFENLEG PIRINISAQK SFQMEAAFGE IRRMIGEGKS QADVDNKINW LKGELTGVLP 120
  121 VLVDGHKLTA EQQHAAYENS DIAVYWQQSF RIIDDLLAQA ISEYQDGKYA EASKSVQQAH 180
  181 YQGFKNSEME MSVRGNRSAQ QAAEINQQFT ALIDLARQPD KMTEVAYRVT GLLHTIEDIL 240
  241 PGLPTTREQQ QITVDQPISS DAIPDTQANA DWAQVSSKIN QAVTEAIGQY QQGKITPAMM 300
  301 AVQDAYFDLF EASGMENKVG SRDAAFKSTL EGHFTRLVGL MKAEKPVEQL QAEAVALQKD 360
  361 LVNAAEMLGD GGETDWSLFV YSLLIIVREG LEALLIVAAI VAYLVKNNHQ DKLPLIRQSV 420
  421 VVALIASVLT AFIFQWLFAN SGQSRELLEG FTMMIAVVML FSMSYWLLSK AEARNWKAYL 480
  481 EGKFAKSLSS GSIIGLWLTS FLAVYREGAE TVLFYLALIG DANTTSGHLS VLAGFGVGCV 540
  541 ILLVAYLVMR FTVVKLPLKP FFIFTGGFMY LMAFVFAGKS VLELIEGKLF EPTLLPGVPE 600
  601 ISWLGIYPYV ETLIPQGVLL IAALVALWVM QWRSRTVHR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..372] PSI-BLAST 23.69897 Heavy meromyosin subfragment
    2 View Details [373..458] deduced N/A No confident structure predictions are available.
    3 View Details [459..639] MSA 1.125971 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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