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Protein Overview: NUSG_YERPE

General Information:
Name(s) found: NUSG_YERPE [Swiss-Prot]
Description(s) found:
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  • gi|32129819|sp|Q8ZAP0.3|NUSG_YERPE RecName: Full=Transcription antitermination protein nusG [NCBI NR]
  • pir||AH0456 transcription antitermination protein nusG [imported] - Yersinia pestis (strain CO92) [NCBI NR]
  • Transcription termination/antitermination protein NusG OS=Yersinia pestis GN=nusG PE=3 SV=3 [Swiss-Prot]
  • transcription antitermination protein [Yersinia pseudotuberculosis IP 32953]gi|16123889|ref|NP_407202.1| transcription antitermination protein [Yersinia pestis CO92]gi|45442869|ref|NP_994408.1| transcription antitermination protein [Yersinia pestis biov [nrdb_11152004_Chlamydomonas]
  • Transcription antitermination protein nusG [nr-271106-contam.fasta]
    • Organism: Yersinia pestis
    Length: 181 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAPKKRWY VVQAFSGFEG RVAQSLREHI KLHDMEELFG EVMVPTEEVV EIRGGQRRKS  60
   61 ERKFFPGYVL VQMVMNDASW HLVRSVPRVM GFIGGTSDRP APISDKEVDA IMNRLQQVGD 120
  121 KPRPKTLFEP GELVRVSDGP FADFNGVVEE VDYEKSRLKV SVSIFGRATP VELDFSQVEK 180
  181 G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] PSI-BLAST 27.045757 N-utilization substance G protein NusG, insert domain; N-utilization substance G protein NusG, C-terminal domain; N-utilization substance G protein NusG, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription termination factor activity
    		•  7.3828495299519 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.63525538465601 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.40236111142017 bayes_pls_golite062009
  • structural molecule activity
    		•  2.11748533169546 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.761013355804059 bayes_pls_golite062009
  • binding
    		•  0.302568764609847 bayes_pls_golite062009
  • DNA binding
    		•  0.302556727687398 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle