Protein Overview: YVYD_BACSU

General Information:
Name(s) found:	YVYD_BACSU [Swiss-Prot]
Description(s) found: Found 8 descriptions. SHOW ALL	Putative sigma-54 modulation protein OS=Bacillus subtilis (strain 168) GN=yvyD PE=1 SV=2 [Swiss-Prot]
Organism:	Bacillus subtilis subsp. subtilis str. 168
Length:	189 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYNIRGENI EVTPALKDHV ERKIGKLERY FDHSVDADVN VNLKFYNDKE SKVEVTIPMT  60
   61 DLALRSEVHN EDMYNAIDLA TNKLERQIRK HKTKVNRKFR EQGSPKYLLA NGLGSDTDIA 120
  121 VQDDIEEEES LDIVRQKRFN LKPMDSEEAI LQMNMLGHNF FVFTNAETNL TNVVYRRNDG 180
  181 KYGLIEPTE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..189]	PSI-BLAST	24.221849	Ribosome binding protein Y (YfiA homologue)

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
binding	1.47304811799096	bayes_pls_golite062009
protein binding	0.411183424287687	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle