YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|57730

General Information:
Name(s) found: gi|57730 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|57730|emb|CAA37458.1| unnamed protein product [Rattus rattus] [NCBI NR]
  • similar to ribosomal protein S13 [Rattus norvegicus]gi|55635357|ref|XP_508306.1| PREDICTED: similar to ribosomal protein S13 [Pan troglodytes]gi|488417|emb|CAA55821.1| ribosomal protein S13 [Homo sapiens]gi|39930505|ref|NP_569116.1| ribosomal protein S [nrdb_11152004_Chlamydomonas]
  • unnamed protein product [Rattus rattus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
    • Organism: Rattus rattus
    Length: 151 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRMHAPGKG LSQSALPYRR SVPTWLKLTS DDVKEQIYKL AKKGLTPSQI GVILRDSHGV  60
   61 AQVRFVTGNK ILRILKSKGL APDLPEDLYH LIKKAVAVRK HLERNRKDKD AKFRLILIES 120
  121 RIHRLARYYK TKRVLPPNWK YESSTASALV A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..60] Pfam 38.585027 No description for PF08069.3 was found. No confident structure predictions are available.
    2 View Details [61..151] PSI-BLAST 24.39794 Localization and dynamic behavior of ribosomal protein L30e


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle