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Protein Overview: gi|328031

General Information:
Name(s) found: gi|328031 [NCBI NR]
Description(s) found:
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  • gi|328031|gb|AAA44851.1| tat protein [NCBI NR]
  • TAT protein (Transactivating regulatory protein)gi|328031|gb|AAA44851.1| tat protein [nrdb_11152004_Chlamydomonas]
  • tat protein [nr-271106-contam.fasta]
    • Organism: Human immunodeficiency virus 1
    Length: 101 amino acids

    Gene Ontology:
    Cellular Component: nucleoplasm [UNKNOWNLink to PubMed article][TAS]
    Biological Process: viral reproduction [TAS]
    positive regulation of viral transcription [TAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPVDPRLEP WKHPGSQPKT ACTTCYCKKC CFHCQVCFTK KALGISYGRK KRRQRRRAPE  60
   61 DSQTHQVSLP KQPAPQFRGD PTGPKESKKK VERETETHPV D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 28.69897 HIV-1 TAT CYS-, NMR, 10 STRUCTURES


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle