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Protein Overview: RL9_ECOL6

General Information:
Name(s) found: RL9_ECOL6 [Swiss-Prot]
Description(s) found:
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  • gi|26251101|ref|NP_757141.1| 50S ribosomal protein L9 [Escherichia coli CFT073] [NCBI NR]
  • gi|26111533|gb|AAN83715.1|AE016771_226 50S ribosomal protein L9 [Escherichia coli CFT073] [NCBI NR]
  • 50S ribosomal protein L9 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rplI PE=3 SV=1 [Swiss-Prot]
  • 50S ribosomal subunit protein L9 [Escherichia coli K12]gi|15834433|ref|NP_313206.1| 50S ribosomal subunit protein L9 [Escherichia coli O157:H7]gi|30065574|ref|NP_839745.1| 50S ribosomal subunit protein L9 [Shigella flexneri 2a str. 2457T]gi|26251101|re [nrdb_11152004_Chlamydomonas]
  • 50S ribosomal protein L9 [Escherichia coli CFT073] [nr-271106-contam.fasta]
    • Organism: Escherichia coli CFT073
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVILLDKVA NLGSLGDQVN VKAGYARNFL VPQGKAVPAT KKNIEFFEAR RAELEAKLAE  60
   61 VLAAANARAE KINALETVTI ASKAGDEGKL FGSIGTRDIA DAVTAAGVEV AKSEVRLPNG 120
  121 VLRTTGEHEV SFQVHSEVFA KVIVNVVAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 45.69897 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  8.6660890573497 bayes_pls_golite062009
  • structural molecule activity
    		•  8.10075613300028 bayes_pls_golite062009
  • catalytic activity
    		•  0.295853503406924 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle