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Protein Overview: YSL12_ORYSJ

General Information:
Name(s) found: YSL12_ORYSJ [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
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  • Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 717 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHANASGG GGDEEMVEAS TLRHRHGAGK DANGVGTERQ LAAAAAEGEE EGPSSVERAF  60
   61 VDRAVPSWRE QLTVRAFVVS FFLSIMFSII VMKLNLTTGI IPSLNVSAGL LGFFFVRLWT 120
  121 AAIERVGLLR QPFTRQENTV IQTCVVAAYG IAFSGGFGTY LFGMSETIAK QATEANNAQN 180
  181 VKNPHIGWMI GFLFLVSFIG LLALVPLRKI MIVDYKLTYP SGTATAYLIN GFHTPEGAKL 240
  241 AKKQVKELGK FFLFSFVWGF FQWFYTAGDG CGFQSFPTLG LQAYKNRFYF DFSPTYVGVG 300
  301 MICPHIVNVS VLLGGILSWG IMWPLIRNKK GSWYAASLSE TSLHGLQGYR VFISIALILG 360
  361 DGLYNFVKVL IRTTAGFVVM MKKNSTLPVS NNGSPMVATE AISFDDERRT ELFLKDQIPK 420
  421 TVAFGGYVAV AAVSIGTLPQ IFPQLKWYYI LVAYVFAPVL AFCNAYGAGL TDWSLASTYG 480
  481 KLAIFIFGAW AGASNGGVLV GLAACGVMMS IVSTASDLMQ DFKTGYLTLA SPRSMFVSQV 540
  541 IGTAMGCVIA PCVFWLFYKA FADIGVSGTE YPAPYAIVYR NMAILGVDGF SSLPKHCLTL 600
  601 CYIFFAAAIA INLARDLAPS KVARFIPLPM AMAIPFYIGS YFAIDMFIGT VILFVWEMVN 660
  661 KAKAEAFAPA VASGLICGDG IWTLPQSILA LAKVKPPICM KFLSRSVNAQ VDGFLGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] MSA 2.194991 View MSA. No confident structure predictions are available.
    2 View Details [99..297] deduced N/A No confident structure predictions are available.
    3 View Details [298..491] MSA 3.215995 View MSA. No confident structure predictions are available.
    4 View Details [492..717] MSA 4.216992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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