YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE38543

General Information:
Name(s) found: CE38543 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00020281 status:Confirmed UniProt:Q9TZH1 protein_id:CCD73365.1 [WormBase]
  • gi|71990283|ref|NP_490780.2| hypothetical protein T06A4.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|62630005|gb|AAC67473.3| Hypothetical protein T06A4.1a [Caenorhabditis elegans] [NCBI NR]
  • CE38543 WBGene00020281 carboxypeptidase status:Partially_confirmed TR:Q9TZH1 protein_id:AAC67473.3 [wormpep150.fasta]
  • 38543 WBGene00020281 carboxypeptidase status:Partially_confirmed TR:Q9TZH1 protein_id:AAC67473.3 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE38543 WBGene00020281 carboxypeptidase status:Partially_confirmed UniProt:Q9TZH1_CAEEL protein_id:AAC67473.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE38543 WBGene00020281 carboxypeptidase status:Partially_confirmed UniProt:Q9TZH1_CAEEL protein_id:AAC67473.3| [wormORF-contam.fasta]
  • T06A4.1a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T06A4.1a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE38543 WBGene00020281 carboxypeptidase status:Partially_confirmed UniProt:Q9TZH1 protein_id:AAC67473.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE38543 WBGene00020281 carboxypeptidase status:Confirmed UniProt:Q9TZH1 protein_id:CCD73365.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE38543 WBGene00020281 status:Confirmed UniProt:Q9TZH1 protein_id:CCD73365.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of H2L0K5, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T06A4.1 PE=1 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 579 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    carboxypeptidase activity [IEALink to PubMed article]
    carboxypeptidase A activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPSILLIF GAFFGFLGAI HNTDDNAGYH NFKLIRINPE TEGSVKYLRS LYEDPSPYEL  60
   61 DFWQPPTNIG AIVDLTVAPA DAPRFVKDLE SKKISYIVAV NDLSKAIENE RGSDKFYNPV 120
  121 AGFAYDKYNS LEEIQTEMKR LKKEYPTMIT LIDIGQSHEN RTLLVMKITG KRNPLGSKIS 180
  181 MWIDAGIHAR EWIAPATAMY IAHELLLGYE NDATVAKLMD HIDFYILPVM NPDGYEYSRE 240
  241 KNRMWRKNRS PAKCARQTFS TVCCSGVDLN RNFDWFWAST GSSSDPCHDT YHGSAAFSEP 300
  301 ESQAVRDFLE QNTPEAFISL HSYSQMWLIP YGHRKQSYPQ DYHTGLRPLA LRATKALYEL 360
  361 YGTKYQVGTG ADLMYEASGG SHDWAKGQLK VPYAYLIELR PKNTMMGHGF LLPEREIVPT 420
  421 GLETFESIKV VADELVAQFV EPVIRAKLTT TTKPAIPPYR RGYSIIDTTT MEPVDEITQK 480
  481 PTEAPTTEEP TTTTTEEPTT PEASTSSETS TTENSEPNQK TSTPVAPEAS TVEEETITPI 540
  541 KCVDYGDYCR LWGVLQLCYR DQVSKLCPKT CDSRCSFSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 112.0 HUMAN PROCARBOXYPEPTIDASE A2
    2 View Details [114..220] PSI-BLAST 17.0 STRUCTURE OF CARBOXYPEPTIDASE B AT 2.8 ANGSTROMS RESOLUTION
    3 View Details [221..439] PSI-BLAST 56.0 STRUCTURE OF CARBOXYPEPTIDASE B AT 2.8 ANGSTROMS RESOLUTION
    4 View Details [440..579] FFAS03 1.55 No description for 2j63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • peptidase activity
    		•  4.786910294594 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.40766568731738 bayes_pls_golite062009
  • hydrolase activity
    		•  4.23257784904124 bayes_pls_golite062009
  • exopeptidase activity
    		•  3.28577934113028 bayes_pls_golite062009
  • metallopeptidase activity
    		•  2.76103081380105 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  2.63658263814587 bayes_pls_golite062009
  • metalloexopeptidase activity
    		•  1.76058821499096 bayes_pls_golite062009
  • metallocarboxypeptidase activity
    		•  1.56827526553175 bayes_pls_golite062009
  • catalytic activity
    		•  1.3989281287879 bayes_pls_golite062009
  • binding
    		•  1.13031326446259 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.910234727191613 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  0.723243947871592 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.596149133958797 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.578572340123331 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.454707207494165 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.273337363793137 bayes_pls_golite062009
  • DNA binding
    		•  0.115087846898245 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.0966237570696103 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle