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Protein Overview: CG17255-PA, CG17...

General Information:
Name(s) found: FBpp0298823 [FlyBase]
CG17255-PB / FBpp0071395 [FlyBase]
CG17255-PA / FBpp0071394 [FlyBase]
Description(s) found:
Found 35 descriptions.
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  • type=protein; loc=X:complement(10358486..10359100,10359176..10359280,10359618..10365571,10365651..10365816,10365913..10366002); ID=FBpp0298823; name=nocte-PC; parent=FBgn0261710,FBtr0307488; dbxref=REFSEQ:NP_001245614,GB_protein:AFH07328,FlyBase:FBpp0298823,FlyBase_Annotation_IDs:CG17255-PC; MD5=a2d2c4a9b8439b72d64b872c9f88b42c; length=2309; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17255 (CG17255, FBgn0030205). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:10357851..10367618. It has the cytological map location 9C6-9D1. Its molecular function is unknown. The biological processes in which it is involved are not known. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17255 (CG17255, FBgn0030205). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:10357851..10367618. It has the cytological map location 9C6-9D1. Its molecular function is unknown. The biological processes in which it is involved are not known. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 2309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: entrainment of circadian clock [IMP]
    temperature compensation of the circadian clock [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLGGSRGE RNAKPKFTAL DINRMYKNSR GESSEPSAQK NQVPRKHGMQ ILGKVPSARR  60
   61 PPANLPSLKA ETHTSSNNNL LVSVEGATSG GAGAGGAAGS GAAGTNTSHN NTTAHSGSSG 120
  121 TSGGAGSGGG GTASSSAGGH LSQQLTHSQH QHNNNVALGP NAGKFVNSNN GSSNNNAGSS 180
  181 GSGNKNFKLI NNSVGSSGGG GQGGSGGGGS SGVGGGSGSG SGGHSVNSPK TWSAITTGHE 240
  241 RGSGGQNYGR QQQQVVPHYQ SPQFQYEFPT LDGTVGSGAG GGSGAGVGSG SGAGKSHYQN 300
  301 QVHHAGHQNH HQHQQHHQQH QQHHHQQQQH HRDYHHGHGR QYGHHSHRDY RDGSDDVGGG 360
  361 SADLGELSLR PQNDTAAWLQ QQEKAAKVAA AAAADQGLNL QGPGHHQMGG NGGAGGGSGG 420
  421 AVPLPILSLM PSFMRSGAPM PASGATAASI LAGGSLDTSA LPNAPYQNGI LGARSASPAV 480
  481 VGSGSFRAAT AIPKRPPTSS SPPQSGLGIG GSPTPPQSQQ QANGGAGGAG RKDKDYVVEP 540
  541 EVAQMQRPII REEDLERLNA IAKDDSWTKQ DDIDFTKKLA FSDDESTPEE HQGQGKQHSS 600
  601 AQLQAQGSSS STDQRKLSAS TTSWQRGKES TDRDQPSEGI QDQQQQLQQQ QQQQEVRQQN 660
  661 GHRGSSGNVG APVAGGIALD ASVYERVKQR KEEEERREME RKQAAAKKLQ ELEMKMNSKK 720
  721 AAAAALAGAE GGVSSASVPL SNEVPPTSAP LGNASEDEGG GQGGGGGLNR RPRGSISSLG 780
  781 SGVTPTGGAG GGGGGVSSSS SAGGDYGQKN FLTHFQSNLP PRFQRQQQQQ QQQLPRLEKS 840
  841 ASASSAFDSN SRYLQKGGVS GGGGGVSGGA QANAGQGRSI SGGYVQRGAS VGGSSGYGRN 900
  901 RHDSSSARED QDLDQQRFTR GQDYRQAQAL PRSISENSHR KTSVSSAGDD VLGGSCSSWA 960
  961 EQTDAEQKVH HRHREESFSS SHSHDSAVQI KILQRPARQP SLSEESSTQQ KQLPASPQQQ1020
 1021 KTLTTDPMPT QILRRSVDID KSGDERAEDK SALESDDKAK SAGKVEEDKS GNKRVSPRSG1080
 1081 AACGGRGGRG YAGSSGGSSV GSGSSYRGQR NASDWGSSRG SGGAGGRRYY GSGGEQSEHS1140
 1141 EDVDEECYSS GGGGAARRSP KESGNGAPNS GASANKAGFS PRGEPSRRGR GGLSSGGGAS1200
 1201 ASCYRRQPVG TGSAGGSGSG GSGRSYGRLG YEEYGKQQRT SESETDLDKT KQNQLALSAG1260
 1261 LHKPSKDDKD LPALGGEEKD KTAALAPAHN TALLAKDELQ KDAAGRLPLP PGLAAPGSAV1320
 1321 GSVTATSSSV VVPGAADKKK IESCAVVGGE KVTGSKLPAI GEKTSLGAVG SGPSTSLLLD1380
 1381 AGAPVNTIIF ENSTYKQQAA AASVVTKPGT LSVSSSGATM TVDSLSSALS QMSFGGKATA1440
 1441 AGSGDDSQDM KLGFSFGDDP TTPLKVVDNI DKTASQQQQQ QQQQHSQQQQ QQQQQQNNST1500
 1501 ADLNMKIASV KKVWESATPM SDGPSPAQVQ QQQQQQPQQQ QQSQVQVAAQ QQQQQVVGPQ1560
 1561 QAGDDGSGHM SAASFVAAVA ASQHQQQHQQ MPHYAVSAVH MQSHHHQQQQ QQQQAAVAAA1620
 1621 QAQHHQQQQA QAHHQHHALS SPGPVPGSHG HGYSHGSPFD AGSLEQQFQQ EDYPSPQQQQ1680
 1681 QAHQKTKQLQ QQQHLGMSPP PSQQQQQQHS QQQQQAQHQQ QQQQAHQQQQ QQQQPSFYQA1740
 1741 SPQFGVGGIP TIPSPPAVVY NSSQMPPPSQ GGNLYAPFHS LDHSSRSPAY SAAAAAHSYP1800
 1801 NPYAAAAAAA AAAAAGGGPF NVNVNAYAMQ TPHGGSLPPT APTPDMYSNL SSQFRLGGGP1860
 1861 GPGPGPFGQP SSQQLSNPSN HAAVAIISSS SNSMMSSGAA KPPQSQQTIG AIGSKSAGSG1920
 1921 GGPGPGPGPY ATTQTYMNLY AAPPPQHPGQ GGPPPGAHQL QSNSFYSNSA PGGPSGPQFY1980
 1981 GGPPPQGNGG AQSYGLATAA GMYGGHQGGP PGSNGPPGPP QSQHTMGTFN TPFMNSQLLT2040
 2041 AASINQYRGG PTPGAAYLKG NQGQTHMQDS MGRQLKSPLS ADMSLGLAKQ VQSQPSPPHH2100
 2101 KNYGAWDLQN QVLQQQQQQS QQQQQQQQRQ VGGGNGPSMN ALGGRGSGAV GSGSGNGGGG2160
 2161 GGGAGGSQVG GNGGGNGVGS VGQSGGGGQG RYPTPIQRPN NYPQHPQQQQ QQQQQQQQQR2220
 2221 EQAAAAAVAA QRAQNMRQVT GAGGGVAGSA GGGGSQTPVG PAGGNGGPGG AGGGGGAGGA2280
 2281 AGSGPGKPYY ANNASGAAVA ANRGEWHAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] Pfam 3.585027 No description for PF07001.2 was found. No confident structure predictions are available.
    2 View Details [191..357] deduced N/A No confident structure predictions are available.
    3 View Details [358..476] deduced N/A No confident structure predictions are available.
    4 View Details [477..667] deduced N/A No confident structure predictions are available.
    5 View Details [668..858] deduced N/A No confident structure predictions are available.
    6 View Details [859..1076] deduced N/A No confident structure predictions are available.
    7 View Details [1077..1303] FFAS03 2.14 Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
    8 View Details [1304..2309] PSI-BLAST 27.522879 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle