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Protein Overview: gi|115487702, gi...

General Information:
Name(s) found: gi|77553232 [NCBI NR]
gi|115487702 [NCBI NR]
gi|113648845 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|77553232|gb|ABA96028.1| VTC2, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115487702|ref|NP_001066338.1| Os12g0190000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113648845|dbj|BAF29357.1| Os12g0190000 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMKLTIKRV PTVVSNYQED AAATAGERPR AGCGRDCLGD CCLPDSKLPL YAFKASPKKP  60
   61 SSQEDASNDE FFVNLLLGLW EDRMARGLFR YDVTACETKV IPGNLGFVAQ LNEGRHLKKR 120
  121 PTEFRVDRVL QPFDAAKFNF TKVGQEEVLF QFENGGGDDS FFVESSPISV ADRAPNVVAI 180
  181 NVSPIEYGHV LLIPRVLDRL PQRIDQESFL LALHMAAEAA SPYFRLGYNS LGAFATINHL 240
  241 HFQAYYLTVP FPVEKAATKR IFLAEGTMNS GVKVSKLMNY PVRGLVFEGG NSLSDLANVV 300
  301 SSACIWLQDN NVPYNVLISD CGKKIFLFPQ CYAEKQALGE VSQELLDTQV NPAVWEISGH 360
  361 IVLKRRSDYE EASEASAWRL LAEVSLSEER FEEVKAYIFD AAGLVQSDEE EVSEDEDATY 420
  421 TPVSIAPPAV AEGCLVLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] MSA 3.063986 View MSA. No confident structure predictions are available.
    2 View Details [140..263] FFAS03 2.6 Crystal structure of rabbit Hint complexed with N-ethylsulfamoyladenosine
    3 View Details [264..438] MSA 1.07999 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle