YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE39453

General Information:
Name(s) found: CE39453 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00013379 status:Confirmed UniProt:Q9U1W7 protein_id:CAB60607.2 [WormBase]
  • gi|82657836|emb|CAB60607.2| C. elegans protein Y62E10A.13b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|115534456|ref|NP_502581.2| hypothetical protein Y62E10A.13 [Caenorhabditis elegans] [NCBI NR]
  • CE39453 WBGene00013379 status:Partially_confirmed UniProt:Q9U1W7_CAEEL protein_id:CAB60607.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39453 WBGene00013379 status:Partially_confirmed UniProt:Q9U1W7_CAEEL protein_id:CAB60607.2| [wormORF-contam.fasta]
  • CE39453 WBGene00013379 status:Partially_confirmed TR:Q9U1W7 protein_id:CAB60607.2 [wormpep160-contam.fasta]
  • Hypothetical protein Y62E10A.13b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y62E10A.13b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE39453 WBGene00013379 status:Confirmed UniProt:Q9U1W7 protein_id:CAB60607.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • Isoform of A0A061ACK7, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y62E10A.13 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: metabolic process [IEALink to PubMed article]
    L-serine biosynthetic process [IEALink to PubMed article]
    Molecular Function: phosphoserine phosphatase activity [IEALink to PubMed article]
    phosphoglycolate phosphatase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    phosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQHQQQYYL FLATLIMIRV ALPTTASAIP RSISTSPGET ISKNHEEEVK RVWRKADAVC  60
   61 FDVDSTVCQD EGIDELAAYL GVGEAVANVT RTAMNGNARF RDALAARLQV MKPNHEQLEQ 120
  121 FVNISKPKLT VGIRELVSRL HARGTHVYLV SGGFRRLILP VAELLGIEKS RIYANEILFD 180
  181 KFGKYHGFDT SELTSDSGSK ETGKPAVIAL LKKMYNYKTV VMVGDGATDV EASPPADAFI 240
  241 GFGGNVIREG VKARAKWYVT DFDVLRKDLD HDESDIDDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 34.0 Phosphoserine phosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoserine phosphatase activity
    		•  2.609399110972 bayes_pls_golite062009
  • hydrolase activity
    		•  1.64652153606264 bayes_pls_golite062009
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • transporter activity
    		•  1.14896368703744 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.05797491861618 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.993187180025513 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.927418188183455 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.90274219445561 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.877641462417465 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.851191468282636 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
    		•  0.787963367346595 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.579515117605331 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.53313021679328 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.506075412583888 bayes_pls_golite062009
  • calcium ion transmembrane transporter activity
    		•  0.493750063720989 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.478053552351263 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.457373743206143 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.436378691321164 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.435443892463434 bayes_pls_golite062009
  • ATPase activity
    		•  0.430637728534119 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.403861776663831 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.402056642959593 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.375649206782765 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.375649206782765 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.374004042755094 bayes_pls_golite062009
  • binding
    		•  0.309823128403058 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.273204868537985 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.204834938376666 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.117331448391929 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle