Protein Overview: RPOC_ANAPZ

General Information:
Name(s) found:	RPOC_ANAPZ [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|88607105\|ref\|YP_505582.1\| DNA-directed RNA polymerase, beta' subunit [Anaplasma phagocytophilum HZ] [NCBI NR] gi\|88598168\|gb\|ABD43638.1\| DNA-directed RNA polymerase, beta' subunit [Anaplasma phagocytophilum HZ] [NCBI NR] gi\|109893824\|sp\|Q2GJ69.1\|RPOC_ANAPZ RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=Transcriptase subunit beta'; AltName: Full=RNA polymerase subunit beta' [NCBI NR] DNA-directed RNA polymerase subunit beta' OS=Anaplasma phagocytophilum (strain HZ) GN=rpoC PE=3 SV=1 [Swiss-Prot] DNA-directed RNA polymerase, beta' subunit [Anaplasma phagocytophilum HZ] [nr-271106-contam.fasta] DNA-directed RNA polymerase beta' chain (RNAP beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) [nr-271106-contam.fasta]
Organism:	Anaplasma phagocytophilum HZ
Length:	1409 amino acids
Gene Ontology:
Cellular Component:	cytosolic DNA-directed RNA polymerase complex [ISS]
Biological Process:	transcription [ISS]
Molecular Function:	DNA-directed RNA polymerase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLDLYGYT SIAQSFDKIC ISIASPESIR AMSYGEIKDI STTNYRTFKV EKGGLFCPKI  60
   61 FGPVNDDECL CGKYRKKRYR GIVCEKCGVE VTSSKVRRER MGHIELVSPV AHIWFLKSLP 120
  121 SRIGALLDMP LKAIENILYS GDFVVIDPVA TPFAKGEVIS EVVYNQARDA YGEDGFFALT 180
  181 GVEAIKELLT RLDLEAIRAT LRNELESTSS EMKRKKVVKR LRLVENFIKS GNRPEWMILT 240
  241 VIPVLPPDLR PLVSLENGRP AVSDLNHHYR TIINRNNRLE KLLKLNPPAI MIRNEKRMLQ 300
  301 EAVDALFDSS RRSYVSSRVG SMGYKKSLSD MLKGKQGRFR QNLLGKRVDY SGRSVIVVGP 360
  361 SLKLHQCGLP KKMALELFKP FICSKLKMYG IAPTVKLANK MIQSEKPDVW DVLDEVIKEH 420
  421 PILLNRAPTL HRLGLQAFDP VLIEGKAIQL HPLVCSAFNA DFDGDQMAVH VPLSQEAQLE 480
  481 ARVLMMSTNN ILSPSNGRPI IVPSKDIVLG IYYLTLLEED PEVREVQTFA EFSHVEYALH 540
  541 EGIVHTCSRI KYRMQKSAAD GTVSSEIVET TPGRLILWQI FPQHKDLTFD LINQVLTVKE 600
  601 ITSIVDLVYR SCGQRETVEF SDKLMYLGFK YASQSGISFG CKDMIIPDTK AAHVEDASEK 660
  661 IREFSIQYQD GLITKSERYN KVVDEWSKCT DLIARDMMKA ISLCDEKGKY NSIYMMANSG 720
  721 ARGSASQMKQ LAGMRGLMAK PSGEIIETPI ISNFREGLSV FEYFNSTHGA RKGLADTALK 780
  781 TANSGYLTRR LVDVAQDCTV VEHDCGTSGG VVARAVIEGG VVVATLDSVV LGRVAAVDTY 840
  841 NPVTGEKLFT SGELIDESKL DKIRVAGLDA VKVRSPLTCE SKQGICALCY GRDLAIGDLV 900
  901 SIGEAVGVIA AQSVGEPGTQ LTMRTFHVGG TAMRGVEVSN LIALMDATVK LVNSNVVTDK 960
  961 YGNQIVMSRS CEVVLLDAAG NEKMRHSVPY GAKLYATEGQ SVSMMEKIAE WDPYTIPIIT1020
 1021 EKTGTIKYVD LIYGVSINEV LDESTGISNR VVVDWKMHLQ GANLRPRLVL LDDNGAVVTL1080
 1081 SSDLEASYFV PIGAVLNVQD GQRVHAGDVI TRIPRGSIKT RDITGGLPRV IELFEARKPK1140
 1141 EHAIVSDVDG YVEFGKDYYR SKRRIFIRPV DKSLPVVEYL VPKGKHTIVN EGDFVHKGDL1200
 1201 LMDGDPDQHD ILRVLGTEAL ANYMISEIQQ VYRLQGVKID NKHIEVILRQ MLQKVEITEP1260
 1261 GDTMYLIGEH VSREEVMKLN RKLAEAGKKE VSYVPILQGI TKASLDTNSF ISAASFQETT1320
 1321 KVLTEAAFAG KEDPLYGLKE NVIVGRLIPA GTGFIMNKIK KLAMLDQSDY ATYYNSELRG1380
 1381 IMGDLGSSII EEFQTPAPDG SISGSVVDY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: RPOC_ANAPZ

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: