Protein Overview: RPOC_NEOSM

General Information:
Name(s) found:	RPOC_NEOSM [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|88608346\|ref\|YP_506555.1\| DNA-directed RNA polymerase, beta' subunit [Neorickettsia sennetsu str. Miyayama] [NCBI NR] gi\|88600515\|gb\|ABD45983.1\| DNA-directed RNA polymerase, beta' subunit [Neorickettsia sennetsu str. Miyayama] [NCBI NR] gi\|109893839\|sp\|Q2GD91.1\|RPOC_NEOSM RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=Transcriptase subunit beta'; AltName: Full=RNA polymerase subunit beta' [NCBI NR] DNA-directed RNA polymerase subunit beta' OS=Neorickettsia sennetsu (strain Miyayama) GN=rpoC PE=3 SV=1 [Swiss-Prot] DNA-directed RNA polymerase beta' chain (RNAP beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) [nr-271106-contam.fasta] DNA-directed RNA polymerase, beta' subunit [Neorickettsia sennetsu str. Miyayama] [nr-271106-contam.fasta]
Organism:	Neorickettsia sennetsu str. Miyayama
Length:	1375 amino acids
Gene Ontology:
Cellular Component:	cytosolic DNA-directed RNA polymerase complex [ISS]
Biological Process:	transcription [ISS]
Molecular Function:	DNA-directed RNA polymerase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDFRSFRQN GGSSVDFDGI KISLASADKI RSLSYGEVTK PETINYRTFK PEKNGLFCAK  60
   61 IFGPTKSYEC LCGKYKKIKY SGVICERCGV EVTSSRVRRE RMGHIELASP VAHIWFLKSL 120
  121 PSKICILLDL TLKNVEKVLY FELYIVIDPG VTTFTKNELI TDEAYMNAVR EYGPDSFTAM 180
  181 IGAEAIRHML ASLDLEKMAV KLRSQAAATN SEVKKKKIIK TLRLVEQFLG SDSRPVDMIL 240
  241 DVIPVMPPDL RPLVMLDGGR FATSDLNALY RSVINRNNRL KSLIYLKAPN IIINNERRML 300
  301 QEAVDALFDN GRRAKVIKGS NKRPYKSISD MLKGKQGRFR QNLLGKRVDY SGRSVIVVGP 360
  361 ALELHQCGLP KKIALELFKP FIYSKLELYG IAPTIKTARR MVQNEQPEVW DVLAKVIHQH 420
  421 PVFLNRAPTL HRLSVQAFEP VLIEGKAIQL HPLVCTAFNA DFDGDQMSVH VPLSIEAQVE 480
  481 ARLLVMSTNN VLNPANSRPI IVPSKDIVLG VYYLSLEEKG GVVHPVTFCA TWEAEHAFAN 540
  541 GDIGLHTKIR CGIELEDGVK VYTTTFGRLQ LLKILPKGVP FESINMVLTV RDISNLVDLV 600
  601 YKTCGHGKTV EFADGIMELG FRYATLSGIS FGKDDMVVPP TKSEHVRRAN EEVKEYEFQY 660
  661 QEGLITKHEK YNKVVDAWQK CTDLVAKDMM DGISGYESVA EMNSIFMMAQ SGARGSAAQI 720
  721 KQLAGMRGLM AKPSGEIIPN PIISNLREGQ GVLEYFNSTH GARKGLADTA LKTANSGYLT 780
  781 RRLVDVAQDS IIVEEDCGSS NGLVVRATVE GGVVIIPLSD SIFSRVSATD IIDPSDGSVI 840
  841 VRAGEMFDDK SIERIESLGI DSVRIRSVLT CKSKHGICRK CYGADLSNRK LVALGEAVGV 900
  901 IAAQSVGEPG TQLTMRTFHV GGAATRRVEN SSMVAFCGGK VKFTNANLIT DRDGNYVVLS 960
  961 RSFEILLVDS LGIEHFQGRV QYGGTVYVKE GEVVPIGKKL ADWDLYTVPI VAEASGTVSY1020
 1021 ADMIEGVSYN EVHDESTGIL NRMVVDWRQA ESSSGLRPRV EILDESGSVA KCQYSKDAVY1080
 1081 LLPLGAILNV SNGDVVKAGD VIAKITKEST TTRDITGGLP RVIELFEARK AKVNAVISEI1140
 1141 DGYVEFAKDY YKSKRKVIVR SREDKERIYE YLVPKGRHLI VSEGDFIRRG EPLMDGDPDL1200
 1201 HEILRVLGLE ALAEYMISEI QRVYRLQGVK INNKHIEVII RKMLQKVEIT DAGDTTFLIG1260
 1261 EQIDKSRVER INEVMASQGL RCCSYVPVLL GITRASLQTE SFISAASFQE TTKVLTEAAV1320
 1321 AGKVDRLRGL KENIIAGRLL PVGAGYFIDK LKREFTGERQ GKQVSVGVGG DLTST

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: RPOC_NEOSM

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: