Protein Overview: RPOC_EHRCR

General Information:
Name(s) found:	RPOC_EHRCR [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|88657749\|ref\|YP_507739.1\| DNA-directed RNA polymerase, beta' subunit [Ehrlichia chaffeensis str. Arkansas] [NCBI NR] gi\|88599206\|gb\|ABD44675.1\| DNA-directed RNA polymerase, beta' subunit [Ehrlichia chaffeensis str. Arkansas] [NCBI NR] gi\|109893830\|sp\|Q2GFP4.1\|RPOC_EHRCR RecName: Full=DNA-directed RNA polymerase subunit beta'; Short=RNAP subunit beta'; AltName: Full=Transcriptase subunit beta'; AltName: Full=RNA polymerase subunit beta' [NCBI NR] DNA-directed RNA polymerase subunit beta' OS=Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) GN=rpoC PE=3 SV=1 [Swiss-Prot] DNA-directed RNA polymerase, beta' subunit [Ehrlichia chaffeensis str. Arkansas] [nr-271106-contam.fasta] DNA-directed RNA polymerase beta' chain (RNAP beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) [nr-271106-contam.fasta]
Organism:	Ehrlichia chaffeensis str. Arkansas
Length:	1410 amino acids
Gene Ontology:
Cellular Component:	cytosolic DNA-directed RNA polymerase complex [ISS]
Biological Process:	transcription [ISS]
Molecular Function:	DNA-directed RNA polymerase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMLDLYGYT SIAQSFDKIC ISIASPESIR AMSYGEIKDI STTNYRTFKV EKGGLFCPKI  60
   61 FGPVNDDECL CGKYRKKRYR GVVCEKCGVE VTSSKVRRER MGHIELVSPV AHVWFLKSLP 120
  121 SRIGALLDMP LKLIENILYS GDFVVIDPIA TPLSKGEVIS ESAYNQAKDN YGEDSFLALT 180
  181 GAEAIRELLV RLDLHAINAN LRVELESTTS EMKRKKIVKR LRIVENFINS GNKPEWMILT 240
  241 VIPILPPDLR PLVSLENGRP AVSDLNHHYR TIINRNNRLG KLLKLNPPAI MIRNEKRMLQ 300
  301 EAVDALFDST RRSYVSNKAG SVGYKKSLSD MLKGKQGRFR QNLLGKRVDY SGRSVIVVGP 360
  361 NLKLHQCGLP KKMALELFKP FICSKLKMYG IVPTVKLANK MIQNEKPEVW DILDEVIHEH 420
  421 PILLNRAPTL HRLGIQAFDP VLIEGKAIQL HPLVCSAFNA DFDGDQMAVH IPLSLEAQLE 480
  481 ARILMMSTNN ILSPSNGKPI IVPSKDIVLG IYYLTLQDQV QSEDEILFFG DFSHVEYALH 540
  541 NKDVHLCSQI KYRMTYCNYD TSDGKPSYYS KIIETTPGRL ILWQIFPQHK NLTFDLINQV 600
  601 LTVKEITSIV DLVYRSCGQS ETVEFSDKLM SLGFKYASQS GISFGCKDMI IPDTKTMHVD 660
  661 NASEKIKEFA VQYQDGLITR SERYNKVIDE WSKCTDLIAK DMMKAISVYD VESKLNSIYM 720
  721 MAHSGARGSA SQMKQLAGMR GLMAKPSGEI IETPIISNFR EGLNVFEYFN STHGARKGLA 780
  781 DTALKTANSG YLTRRLVDVA QDCIVVEYDC KTHNGFAIRS VVEGGTVVET LDNIILGRVA 840
  841 AVDVYNPITE ELLVKAGELI DEAKVEKIKI AGLDAVKVRS PLTCEAKKGI CALCYGRDLA 900
  901 IGDVVSIGEA VGVIAAQSVG EPGTQLTMRT FHVGGTAMRG VETSNLIALL DAKVKLVNSN 960
  961 IVEDKHGNKI VMSRSCEVVL LDSVGNEKMR HNVPYGARLY VDDGQLVKIT EKIAEWDPYT1020
 1021 MPIITEKTGI IKYMDLIDGV SINEVLDEST GISNRVVVDW KLHLQGANLR PRLVLIDDND1080
 1081 NIITLSNGLE ANYFIPIGAV LNVQDGQKVH AGDVITRIPR DSIKTRDITG GLPRVIELFE1140
 1141 ARRPKEHAIV SDIDGYVEFG KDYYRSKRRI FIKPVSDTLS PVEYLVPKGK HTIVNEGDFV1200
 1201 HKGDLLMDGD PDPHDILRVL GVEALANYMI SEIQQVYRLQ GVRIDNKHIE IILRQMLQKV1260
 1261 EIFEPGDTMY LVGENIDMEE VIKTNDNMVK MGKSPAKYAP ILQGITRASL DTNSFVSAAS1320
 1321 FQETTKVLTE AAFSGKEDSL YGLKENVIVG RLIPAGTGFL MNKIKKLSLL NKEDYSMYYN1380
 1381 NEYQDSALLQ NDNNAFNQEL HKDTGNIVDY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: RPOC_EHRCR

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: