Protein Overview: YHDD_SCHPO

General Information:
Name(s) found:	YHDD_SCHPO [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|19111861\|ref\|NP_595069.1\| transcriptional regulator [Schizosaccharomyces pombe 972h-] [NCBI NR] Uncharacterized transcriptional regulatory protein C1683.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.13c PE=1 SV=1 [Swiss-Prot]
Organism:	Schizosaccharomyces pombe 972h-
Length:	618 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMKPRQDKK NQEIFRISCQ RCRQRKIKCD RLHPCFQCVK SNSQCFYPED PIRRRAPKEY  60
   61 VEALERQIAF FEAFVKKLAK VGSDEQSLMI QDMNNKIVNE GNEYDQTPDI SARKRRKHFR 120
  121 MLPQNNFRYF QFYGTTNVIS ASNLTTTSEI PTFKFPIFSK RKYNDTENLY EQPFHLEFDT 180
  181 CQELLSLFFL KQYHNFMFVF RDYFIRDFEL GGGPYYSQWL LFAICSIGAM ISPDDDLKNL 240
  241 SNTLANIAEK WVLDEGLNSP DITTLQTLLV LGIREIGRGL TFKGWLFSGM AFRLVYDMGL 300
  301 HLDPDHWDHS EESRIDREVR RRCFWGCFTL DKLISLCYGR PPGLYLKQTD VRNTTQLPYI 360
  361 SELDEPFEIF NKKSELFAAV SAGEDRRGLV QFWLNQVELC KIIHRMLTEV FEDRTSSVLE 420
  421 ASINNIHTEL QKWIADIPME LQWNTRSQKE TSSTVLLLHM LYHSVIIILN RPSDDNYLKL 480
  481 DNTERYTFEI CWKSAKTIVQ LLKIYFKKYD ADCLPMTFIH IATSAARIIL VKLNENIPED 540
  541 GDVCNIYLEI ITNALDVCAN VWPLASQASR AILNAYKSCA TSPKENNEDS LPLQRSPSLD 600
  601 DVSRFDSLDY IFSPNVKY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
transcription regulator activity	4.56444258780502	bayes_pls_golite062009
DNA binding	4.26146437716972	bayes_pls_golite062009
nucleic acid binding	4.17369933547911	bayes_pls_golite062009
transcription factor activity	3.049435548132	bayes_pls_golite062009
binding	2.91929847152301	bayes_pls_golite062009
RNA polymerase II transcription factor activity	2.03201524223606	bayes_pls_golite062009
sequence-specific DNA binding	1.87955444697212	bayes_pls_golite062009
specific RNA polymerase II transcription factor activity	1.86200506906385	bayes_pls_golite062009
transcription activator activity	0.915626626047549	bayes_pls_golite062009

No functions predicted.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.91

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..148]	PSI-BLAST	3.09691	Gal4; CD2-Gal4
2	View Details	[149..275]	deduced	N/A	No confident structure predictions are available.
3	View Details	[276..350]	Pfam	33.920819	No description for PF04082.9 was found. No confident structure predictions are available.
4	View Details	[351..469]	deduced	N/A	No confident structure predictions are available.
5	View Details	[470..618]	MSA	5.366997	View MSA. No confident structure predictions are available.

Protein Overview: YHDD_SCHPO

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: