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Protein Overview: gi|194431494, gi...

General Information:
Name(s) found: gi|83571229 [NCBI NR]
gi|194431494 [NCBI NR]
gi|194420319 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|83571229|ref|ZP_00922670.1| COG0717: Deoxycytidine deaminase [Shigella dysenteriae 1012] [NCBI NR]
  • gi|194431494|ref|ZP_03063786.1| deoxycytidine triphosphate deaminase [Shigella dysenteriae 1012] [NCBI NR]
  • gi|194420319|gb|EDX36396.1| deoxycytidine triphosphate deaminase [Shigella dysenteriae 1012] [NCBI NR]
    • Organism: Shigella dysenteriae 1012
    Length: 193 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLCDRDIEA WLDEGRLSIN PRPPVERING ATVDVRLGNK FRTFRGHTAA FIDLSGPKDE  60
   61 VSAALDRVMS DEIVLDEGEA FYLHPGELAL AVTLESVTLP ADLVGWLDGR SSLARLGLMV 120
  121 HVTAHRIDPG WSGCIVLEFY NSGKLPLALR PGMLIGALSF EPLSGPAARP YNRREDAKYR 180
  181 NQQGAVASRI DKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] PSI-BLAST 53.39794 dCTP deaminase from Escherichia coli in complex with dUTP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphate diphosphatase activity
    		•  4.9446386219436 bayes_pls_golite062009
  • dUTP diphosphatase activity
    		•  4.92207428503442 bayes_pls_golite062009
  • dCTP deaminase activity
    		•  4.60235481565849 bayes_pls_golite062009
  • catalytic activity
    		•  1.71668532866244 bayes_pls_golite062009
  • hydrolase activity
    		•  1.63889579722321 bayes_pls_golite062009
  • deaminase activity
    		•  0.569997469329081 bayes_pls_golite062009
  • peroxisome proliferator activated receptor binding
    		•  0.383360698341246 bayes_pls_golite062009
  • binding
    		•  0.15452287545479 bayes_pls_golite062009
  • pyrimidine deoxyribonucleotide binding
    		•  0.0405835740740832 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle