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Protein Overview: RLMN_SHISS

General Information:
Name(s) found: RLMN_SHISS [Swiss-Prot]
Description(s) found:
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  • gi|74313043|ref|YP_311462.1| hypothetical protein SSON_2599 [Shigella sonnei Ss046] [NCBI NR]
  • gi|73856520|gb|AAZ89227.1| conserved hypothetical protein [Shigella sonnei Ss046] [NCBI NR]
  • gi|123773477|sp|Q3YZ35.1|RLMN_SHISS RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase [NCBI NR]
  • Dual-specificity RNA methyltransferase RlmN OS=Shigella sonnei (strain Ss046) GN=rlmN PE=3 SV=1 [Swiss-Prot]
  • conserved hypothetical protein [Shigella sonnei Ss046] [nr-271106-contam.fasta]
  • hypothetical protein SSO_2599 [Shigella sonnei Ss046] [nr-271106-contam.fasta]
    • Organism: Shigella sonnei Ss046
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQLVTPEN VTTKDGKINL LDLNRQQMRE FFKDLGEKPF RADQVMKWMY HYCCDNFDEM  60
   61 TDINKVLRGK LKEVAEIRAP EVVEEQRSSD GTIKWAIAVG DQRVETVYIP EDDRATLCVS 120
  121 SQVGCALECK FCSTAQQGFN RNLRVSEIIG QVWRAAKIVG AAKVTGQRPI TNVVMMGMGE 180
  181 PLLNLNNVVP AMEIMLDDFG FGLSKRRVTL STSGVVPALD KLGDMIDVAL AISLHAPNDE 240
  241 IRDEIVPINK KYNIETFLAA VRRYLEKSNA NQGRVTIEYV MLDHVNDGTE HAHQLAELLK 300
  301 DTPCKINLIP WNPFPGAPYG RSSNSRIDRF SKVLMSYGFT TIVRKTRGDD IDAACGQLAG 360
  361 DVIDRTKRTL RKRMQGEAID IKAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] MSA 1.195992 View MSA. Confident ab initio structure predictions are available.
    2 View Details [102..384] PSI-BLAST 24.045757 No description for 2qgqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle