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Protein Overview: gi|75176493, gi|...

General Information:
Name(s) found: gi|75176493 [NCBI NR]
gi|187732326 [NCBI NR]
gi|187429318 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|75176493|ref|ZP_00696630.1| COG0265: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Shigella boydii BS512] [NCBI NR]
  • gi|187732326|ref|YP_001878964.1| protease Do [Shigella boydii CDC 3083-94] [NCBI NR]
  • gi|187429318|gb|ACD08592.1| protease Do [Shigella boydii CDC 3083-94] [NCBI NR]
    • Organism: Shigella boydii CDC 3083-94
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTTLALSA LALSLGLALS PLSATAAETS SATTAQQMPS LAPMLEKVMP SVVSINVEGS  60
   61 TTVNTPRMPR NFQQFFGDDS PFCQEGSPFQ SSPFCQGGQG GNGGGQQQKF MALGSGVIID 120
  121 ADKGYVVTNN HVVDNATVIK VQLSDGRKFD AKMVGKDPRS DIALIQIQNP KNLTAIKMAD 180
  181 SDALRVGDYT VAIGNPFGLG ETVTSGIVSA LGRSGLNAEN YENFIQTDAA INRGNSGGAL 240
  241 VNLNGELIGI NTAILAPDGG NIGIGFAIPS NMVKNLTSQM VEYGQVKRGE LGIMGTELNS 300
  301 ELAKAMKVDA QRGAFVSQVL PNSSAAKAGI KAGDVITSLN GKPISSFAAL RAQVGTMPVG 360
  361 SKLTLGLLRD GKQVNVNLEL QQSSQNQVDS SSIFNGIEGA EMSNKGKDQG VVVNNVKTGT 420
  421 PAAQIGLKKG DVIIGANQQA VKNIAELRKV LDSKPSVLAL NIQRGDSTIY LLMQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..474] PSI-BLAST 104.0 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  5.28251016030465 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.93232564230667 bayes_pls_golite062009
  • endopeptidase activity
    		•  4.76863192965644 bayes_pls_golite062009
  • hydrolase activity
    		•  4.7420645083083 bayes_pls_golite062009
  • serine hydrolase activity
    		•  3.40985043278892 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  3.40724860044542 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  3.13486560415684 bayes_pls_golite062009
  • catalytic activity
    		•  1.40927913545237 bayes_pls_golite062009
  • protein binding
    		•  0.0013332686405948 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle