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Protein Overview: gi|84523894

General Information:
Name(s) found: gi|84523894 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|84523894|ref|ZP_01011030.1| COG0817: Holliday junction resolvasome, endonuclease subunit [Burkholderia mallei SAVP1] [NCBI NR]
    • Organism: Burkholderia mallei SAVP1
    Length: 180 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILGIDPGL RVTGFGVIDV SGHQLAYVAS GVIKTPTADL PTRLGTIYDG VSTLIREHTP  60
   61 DQAAIEKVFV NVNPQSTLLL GQARGAAICG LVSGGLPVAE YTALQLKQAV VGYGRATKEQ 120
  121 MQEMVARLLS LSGRPGTDAA DALGMAICHA HGGNTLNTLG GIAPALAKKG LRVRRGRLVG 180
  181

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] PSI-BLAST 51.0 RuvC resolvase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • exonuclease activity
    		•  2.2254764376369 bayes_pls_golite062009
  • nuclease activity
    		•  2.17358374135419 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.75713164321634 bayes_pls_golite062009
  • hydrolase activity
    		•  1.52863974928789 bayes_pls_golite062009
  • catalytic activity
    		•  1.25233849524628 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  1.19309748194103 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  1.1219517187744 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.901073799675851 bayes_pls_golite062009
  • DNA polymerase activity
    		•  0.717600245625866 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
    		•  0.568273228950698 bayes_pls_golite062009
  • endonuclease activity
    		•  0.527074808116937 bayes_pls_golite062009
  • exodeoxyribonuclease activity
    		•  0.278838342302102 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  0.261428436029202 bayes_pls_golite062009
  • binding
    		•  0.122249780594036 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  0.115254148049348 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle