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Protein Overview: gi|57165860, gi|...

General Information:
Name(s) found: gi|57237056 [NCBI NR]
gi|57165860 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|57237056|ref|YP_178068.1| flagellar basal body rod modification protein [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57165860|gb|AAW34639.1| flagellar hook assembly protein [Campylobacter jejuni RM1221] [NCBI NR]
    • Organism: Campylobacter jejuni RM1221
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: bacterial-type flagellum hook [ISSLink to PubMed article]
    Biological Process: ciliary or flagellar motility [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSSDWNLN TTATTSGTTS SGSTSGTTRT DSSSSSGIVS NPNATLDKDA FLKLLLIELQ  60
   61 HQDPTDPMDS DKMLTQTSQL SALEMQQNTN TTMQKMVETM QKLSDSFSTS MSTSALGAIG 120
  121 KMATVSDNKI KLTGADELIA LKMYLPEDSD ENGVTLEIYD SNNKLVFSEK SDAKSISQGL 180
  181 FTMEWPGRNN DGVYAGDGEY TVKMVYNNKN GEKITANYGT YPIEGVVFKD GVAYAKMAGQ 240
  241 EVPFDAIQEI TDYKLGSSSS TGGSGSSGDS SGGSSDGDSS GSGSTEDGDK EEKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] Pfam 6.481486 No description for PF03963.5 was found. No confident structure predictions are available.
    2 View Details [147..196] PSI-BLAST 5.045757 Structure of C5a peptidase- a key virulence factor from Streptococcus
    3 View Details [197..294] FFAS03 0.976 K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle