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Protein Overview: gi|75814846, gi|...

General Information:
Name(s) found: gi|75814846 [NCBI NR]
gi|121729761 [NCBI NR]
gi|121628512 [NCBI NR]
Description(s) found:
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  • gi|75814846|ref|ZP_00745391.1| COG0307: Riboflavin synthase alpha chain [Vibrio cholerae V52] [NCBI NR]
  • gi|121729761|ref|ZP_01682200.1| riboflavin synthase, alpha subunit [Vibrio cholerae V52] [NCBI NR]
  • gi|121628512|gb|EAX60998.1| riboflavin synthase, alpha subunit [Vibrio cholerae V52] [NCBI NR]
  • COG0307: Riboflavin synthase alpha chain [Vibrio cholerae V52] [nr-271106-contam.fasta]
    • Organism: Vibrio cholerae V52
    Length: 217 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTGIVEAVG KLTAIIPKGS DVTISVDVGK LDMGDVKLGD SIATNGVCLT VVAFDQRSFS  60
   61 ADLSMETLKK SGFAQYQVGD RVNLEKAMLP TTRFGGHIVS GHVDGVGEIV ERIPVGRAVD 120
  121 LWVNMPAEIS KYVAEKGSIT VDGISLTVND LRKNAFKLTI VPHTSAETTI DEFQVGRRVN 180
  181 LEVDVLARYM ERLLQGQQES EPQSRLTMAF LQQNGFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] PSI-BLAST 74.69897 Riboflavin synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • riboflavin synthase activity
    		•  5.11500941509376 bayes_pls_golite062009
  • catalytic activity
    		•  2.05427820269334 bayes_pls_golite062009
  • transferase activity
    		•  0.708491789248912 bayes_pls_golite062009
  • binding
    		•  0.534066059984103 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle