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Protein Overview: gi|117672935, gi...

General Information:
Name(s) found: gi|77629839 [NCBI NR]
gi|153946892 [NCBI NR]
gi|152958387 [NCBI NR]
gi|117672935 [NCBI NR]
Description(s) found:
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  • gi|77629839|ref|ZP_00792425.1| COG0299: Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Yersinia pseudotuberculosis IP 31758] [NCBI NR]
  • gi|153946892|ref|YP_001400214.1| phosphoribosylglycinamide formyltransferase [Yersinia pseudotuberculosis IP 31758] [NCBI NR]
  • gi|152958387|gb|ABS45848.1| phosphoribosylglycinamide formyltransferase [Yersinia pseudotuberculosis IP 31758] [NCBI NR]
  • gi|117672935|ref|ZP_01495993.1| hypothetical protein YpseI_02001120 [Yersinia pseudotuberculosis IP 31758] [NCBI NR]
  • hypothetical protein YpseI_02001120 [Yersinia pseudotuberculosis IP 31758] [nr-271106-contam.fasta]
    • Organism: Yersinia pseudotuberculosis IP 31758
    Length: 212 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIVVLISG QGSNLQALID AQQQGRISGK ISAVFSNNPA AYGLERAESA GIPHHALDAK  60
   61 AFTDRVSFDL ALAQAIDQYQ PDLLVLAGYM RILSPEFVKH YAGRMLNIHP SLLPKYPGLH 120
  121 THRQALENGD QEHGTSVHFV TEELDGGPVI LQAKVPIFSD DSEEDVAERV QTQEHSIYPL 180
  181 VVSWFTDGRL AMRDNAAWLD GVRLPLQGYA AE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] PSI-BLAST 60.30103 Glycinamide ribonucleotide transformylase, GART

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methyltransferase activity
    		•  4.09881190860822 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  4.01667310557403 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  3.81159871979977 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  3.49010887242285 bayes_pls_golite062009
  • phosphoribosylglycinamide formyltransferase activity
    		•  2.94311083909314 bayes_pls_golite062009
  • methionyl-tRNA formyltransferase activity
    		•  2.39150724300118 bayes_pls_golite062009
  • catalytic activity
    		•  2.16003793103722 bayes_pls_golite062009
  • binding
    		•  1.1813924954238 bayes_pls_golite062009
  • transferase activity
    		•  1.01502594768782 bayes_pls_golite062009
  • ligase activity
    		•  0.922788719307786 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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