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Protein Overview: gi|60654807, gi|...

General Information:
Name(s) found: gi|60654809 [NCBI NR]
gi|60654807 [NCBI NR]
gi|208965964 [NCBI NR]
gi|123996025 [NCBI NR]
gi|123981188 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|60654809|gb|AAX31969.1| chemokine (C-C motif) ligand 13 [synthetic construct] [NCBI NR]
  • gi|60654807|gb|AAX31968.1| chemokine (C-C motif) ligand 13 [synthetic construct] [NCBI NR]
  • gi|208965964|dbj|BAG72996.1| chemokine (C-C motif) ligand 13 [synthetic construct] [NCBI NR]
  • gi|123996025|gb|ABM85614.1| chemokine (C-C motif) ligand 13 [synthetic construct] [NCBI NR]
  • gi|123981188|gb|ABM82423.1| chemokine (C-C motif) ligand 13 [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 98 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVSAVLLCL LLMTAAFNPQ GLAQPDALNV PSTCCFTFSS KKISLQRLKS YVITTSRCPQ  60
   61 KAVIFRTKLG KEICADPKEK WVQNYMKHLG RKAHTLKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] PSI-BLAST 22.69897 MONOCYTE CHEMOATTRACTANT PROTEIN-3, NMR, MINIMIZED AVERAGE STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytokine activity
    		•  8.07273475133641 bayes_pls_golite062009
  • chemokine receptor binding
    		•  7.19574940007631 bayes_pls_golite062009
  • chemokine activity
    		•  7.19574940007631 bayes_pls_golite062009
  • G-protein-coupled receptor binding
    		•  7.12866319987718 bayes_pls_golite062009
  • receptor binding
    		•  5.70505228637425 bayes_pls_golite062009
  • protein binding
    		•  3.96178206863622 bayes_pls_golite062009
  • interleukin-8 receptor binding
    		•  3.86135397575984 bayes_pls_golite062009
  • binding
    		•  3.44333267537536 bayes_pls_golite062009
  • chemoattractant activity
    		•  3.05299139114464 bayes_pls_golite062009
  • heparin binding
    		•  2.48790323783525 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.80091312295242 bayes_pls_golite062009
  • CCR2 chemokine receptor binding
    		•  1.78317158345185 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.28416986663426 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.2394639113112 bayes_pls_golite062009
  • kinase activity
    		•  1.20242374860894 bayes_pls_golite062009
  • protein kinase activity
    		•  1.20167556785693 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.05370662506053 bayes_pls_golite062009
  • pattern binding
    		•  1.02739535268516 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.0107537553708 bayes_pls_golite062009
  • CCR chemokine receptor binding
    		•  0.697359799598971 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.14673741350408 bayes_pls_golite062009
  • catalytic activity
    		•  0.11400259673574 bayes_pls_golite062009
  • transporter activity
    		•  0.0541029584618528 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle