Protein Overview: RPOC_RUEPO

General Information:
Name(s) found:	RPOC_RUEPO [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|56698329\|ref\|YP_168702.1\| DNA-directed RNA polymerase subunit beta' [Ruegeria pomeroyi DSS-3] [NCBI NR] gi\|56680066\|gb\|AAV96732.1\| DNA-directed RNA polymerase, beta' subunit [Ruegeria pomeroyi DSS-3] [NCBI NR] DNA-directed RNA polymerase subunit beta' OS=Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=rpoC PE=3 SV=1 [Swiss-Prot] DNA-directed RNA polymerase subunit beta' OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=rpoC PE=3 SV=1 [Swiss-Prot] DNA-directed RNA polymerase beta' subunit [Silicibacter pomeroyi DSS-3] [nr-271106-contam.fasta] DNA-directed RNA polymerase, beta' subunit [Silicibacter pomeroyi DSS-3] [nr-271106-contam.fasta]
Organism:	Ruegeria pomeroyi DSS-3
Length:	1413 amino acids
Gene Ontology:
Cellular Component:	cytosolic DNA-directed RNA polymerase complex [ISS]
Biological Process:	transcription [ISS]
Molecular Function:	DNA-directed RNA polymerase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQELTNNPF NPLTPPKVFD EIKVSLASPE RILSWSYGEI KKPETINYRT FKPERDGLFC  60
   61 ARIFGPIKDY ECLCGKYKRM KYRGVVCEKC GVEVTLQKVR RERMGHIELA APVAHIWFLK 120
  121 SLPSRIGLML DMTLRDLERI LYFENYVVTE PGLTDLTYGQ LMTEEEFMDA QDQYGMDAFT 180
  181 ANIGAEAIRE MLSQIDLEAE AEQLRADLAE ATGELKPKKI IKRLKVVESF LESGNRPEWM 240
  241 VLTVIPVIPP ELRPLVPLDG GRFATSDLND LYRRVINRNN RLKRLIELRA PDIIVRNEKR 300
  301 MLQESVDALF DNGRRGRVIT GANKRPLKSL SDMLKGKQGR FRQNLLGKRV DFSGRSVIVT 360
  361 GPELKLHQCG LPKKMALELF KPFIYSRLEA KGLSSTVKQA KKLVEKERPE VWDILDEVIR 420
  421 EHPVLLNRAP TLHRLGIQAF EPILIEGKAI QLHPLVCSAF NADFDGDQMA VHVPLSLEAQ 480
  481 LEARVLMMST NNVLSPANGA PIIVPSQDMI LGLYYLTLER EGMVGEGKIF GSIDEVQHAL 540
  541 DAGEVHLHTK ITARIAQIDD EGNEVLKRVE TTPGRVRLGA LLPMNNKAPF ELVNRLLRKK 600
  601 EVQQVIDTVY RYCGQKESVI FCDQIMTMGF REAFKAGISF GKDDMVIPDD KWGIVDETRD 660
  661 QVKDFEQQYM DGLITQGEKY NKVVDAWSKC NDRVTEAMMS TISADKRDEN GAVMEPNSVY 720
  721 MMAHSGARGS VTQMKQLGGM RGLMAKPNGD IIETPIISNF KEGLTVLEYF NSTHGARKGL 780
  781 SDTALKTANS GYLTRRLVDV AQDCIVREHD CGTDRGVTAE AAVNDGEVVA SLAERVLGRV 840
  841 AADDILRPGT EEVLVAAGQL IDERMADAIH EAGVQTSRVR SPLTCESEEG VCAMCYGRDL 900
  901 ARGTMVNQGE AVGIIAAQSI GEPGTQLTMR TFHIGGVAQG GQQSFQEANQ DGTITFENPQ 960
  961 LLLNASGESL VMGRNMKLLI KDAQGEERAS FKLGYGSKLF VKDGAQIKRG DKLFEWDPYT1020
 1021 LPIIAEKAGT AKYVDLVSGI AVRDETDEAT GMTQKIVIDW RAAPKGSDLK PEIILVDSDG1080
 1081 EPVRNDAGNP VHYPMSVDAI LSIEDGQVIE AGDVIARIPR EGAKTKDITG GLPRVAELFE1140
 1141 ARRPKDHAII AEIDGYVRFG RDYKNKRRIS IEPSNEAMEP VEYMVPKGKH IPVQEGDFVQ1200
 1201 KGDYIMDGNP APHDILSILG VEALANYMVK EVQEVYRLQG VKINDKHIEV IVRQMLQKWE1260
 1261 ISDSGDTTLL KGEHVDKQEF DAANEKTIAR GGRPASGEPI LLGITKASLQ TRSFISAASF1320
 1321 QETTRVLTEA SVQGKKDKLV GLKENVIVGR LIPAGTGGAT QQMRHIATQR DNVVIAARRE1380
 1381 EAEAAAALAA PIMDADIVDD DFDTLVDTPE SRD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Protein Overview: RPOC_RUEPO

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: