Protein Overview: RPOB_RUEPO

General Information:
Name(s) found:	RPOB_RUEPO [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|56698330\|ref\|YP_168703.1\| DNA-directed RNA polymerase subunit beta [Ruegeria pomeroyi DSS-3] [NCBI NR] gi\|56680067\|gb\|AAV96733.1\| DNA-directed RNA polymerase, beta subunit [Ruegeria pomeroyi DSS-3] [NCBI NR] DNA-directed RNA polymerase subunit beta OS=Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=rpoB PE=3 SV=1 [Swiss-Prot] DNA-directed RNA polymerase subunit beta OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=rpoB PE=3 SV=1 [Swiss-Prot] DNA-directed RNA polymerase, beta subunit [Silicibacter pomeroyi DSS-3] [nr-271106-contam.fasta] DNA-directed RNA polymerase beta subunit [Silicibacter pomeroyi DSS-3] [nr-271106-contam.fasta]
Organism:	Ruegeria pomeroyi DSS-3
Length:	1378 amino acids
Gene Ontology:
Cellular Component:	cytosolic DNA-directed RNA polymerase complex [ISS]
Biological Process:	transcription [ISS]
Molecular Function:	DNA-directed RNA polymerase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTFLGQKR LRKYYGKIRE VLEMPNLIEV QKSSYDLFLN SGDAPQPLDG EGIMGVFQSV  60
   61 FPIKDFNETS VLEFVKYELE KPKYDVEECM QRDMTYSAPL KVTLRLIVFD VDEDTGAKSV 120
  121 KDIKEQDVFM GDMPLMTPNG TFIVNGTERV IVSQMHRSPG VFFDHDKGKT HSSGKLLFAC 180
  181 RIIPYRGSWL DFEFDAKDIV FARIDRRRKL PVTTLLYALG LDQEGIMDAY FKTVSYRLEK 240
  241 KRGWVTPFFP ERVRGTRPTY DLIDAASGEV IAEAGKKVTP RAVKKLIEEG SVTDLLVPFD 300
  301 HIVGKFAAKD IINEETGAIY VEAGDELTLE YDKDGDLIGG TVKELIDNGV TNIPVLDIDN 360
  361 INVGPYIRNT MAQDKNMNRE TALMDIYRVM RPGEPPTVEA ASALFDTLFF DSERYDLSAV 420
  421 GRVKMNMRLD LDAADTQRTL RREDIIACIK ALVELRDGKG DIDDIDHLGN RRVRSVGELM 480
  481 ENQYRVGLLR MERAIKERMS SVEIDTVMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQTNP 540
  541 LSEVTHKRRL SALGPGGLTR ERAGFEVRDV HPTHYGRMCP IETPEGPNIG LINSLATFAR 600
  601 VNKYGFIETP YRVVKGGQVT DEVHYMSATE EMRHTVAQAN ATLDENGKFV NELVNTRQAG 660
  661 DYTLAPMESV DLIDVSPKQL VSVAASLIPF LENDDANRAL MGSNMQRQAV PLLRAEAPLV 720
  721 GTGIEEKVAI DSGAAIQAKR AGIIDQIDAQ RIVIRATEDL ELGDAGVDIY RMRKFQRSNQ 780
  781 NTCINQRPLV KVGQQVSKGE VIADGPSTDM GELALGKNVV VAFMPWNGYN YEDSILISER 840
  841 IARDDVFTSI HIEEFEVAAR DTKLGPEEIT RDIPNVGEEA LRNLDEAGIV YIGAEVQPGD 900
  901 ILVGKITPKG ESPMTPEEKL LRAIFGEKAS DVRDTSLRVK PGDYGTVVEV RVFNRHGVDK 960
  961 DERALQIERE EVERLARDRD DELAILDRNI YARLKSLILG KTAVKGPKGI KPGSEITEEL1020
 1021 LETLTRGQWW MLALEGEQDA QIVEALNEQY ELQKRALDAR FEDKVEKVRR GDDLPPGVMK1080
 1081 MVKVFIAVKR KLQPGDKMAG RHGNKGVISK VVPMEDMPFL ADGTPVDFCL NPLGVPSRMN1140
 1141 VGQILETHMG WAARGLGLNV DEALQEYRRS GDLTPVRDAM KHAYGEDVYA EGISGMDEDT1200
 1201 LVEAAGNVTR GVPIATPVFD GAKEADVNDA LTRAGFDTSG QSVLFDGRTG EQFARPVTVG1260
 1261 IKYLLKLHHL VDDKIHARST GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL EAYGAAYTLQ1320
 1321 EMLTVKSDDV AGRTKVYESI VKGEDNFEAG IPESFNVLVK EVRGLGLNME LLDAEVEE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: RPOB_RUEPO

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: