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Protein Overview: RTT105

General Information:
Name(s) found: RTT105 / YER104W [SGD]
Description(s) found:
Found 27 descriptions.
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  • Protein with a role in regulation of Ty1 transposition [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: negative regulation of transposition, DNA-mediated [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSNHNLNSD DCCFDWNEEK AAELQRTGVS FDRSLTPQSL RTSTRRLSEE NKQQSGTMHI  60
   61 DTSPSVVSDI ISSRRDRSQD FFGPHSSSPI APSERQRADQ RSRLESMRLT RRRDKMTKVR 120
  121 GGLEKMEEMI MQGEHLREMQ RLKQEAQKNA LPSDMAEYME WQNNEDLEDD ELLAFIEKQE 180
  181 TYKNELEHFL NNANKNVYEN NSYPNSHT

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) RFA1 RFA2 RFA3 RTT105

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen INP52 RTT105 2 Unpublished Fields Lab Data
    View Screen REH1 RTT105 1 Unpublished Fields Lab Data
    View Screen SPO1 RTT105 1 Unpublished Fields Lab Data
    View Screen RPL33A RTT105 1 Unpublished Fields Lab Data
    View Screen SEC17 RTT105 1 Unpublished Fields Lab Data
    View Screen PAU3 RTT105 1 Unpublished Fields Lab Data
    View Screen SWI5 RTT105 1 Unpublished Fields Lab Data
    View Screen MFB1 RTT105 1 Unpublished Fields Lab Data
    View Screen RPN11 RTT105 1 Unpublished Fields Lab Data
    View Screen SNF4 RTT105 1 Unpublished Fields Lab Data
    View Screen TWF1 RTT105 1 Unpublished Fields Lab Data
    View Screen PPT1 RTT105 1 Unpublished Fields Lab Data
    View Screen YHR022C RTT105 1 Unpublished Fields Lab Data
    View Screen YHR122W RTT105 1 Hazbun TR, et al. (2003)
    View Screen UTP9 RTT105 1 Unpublished Fields Lab Data
    View Screen FAR10 RTT105 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data RTT105 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle