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Protein Overview: YKL053W

General Information:
Name(s) found: YKL053W [SGD]
Description(s) found:
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  • gi|549680|sp|P35733.1|YKF3_YEAST RecName: Full=Putative uncharacterized protein YKL053W [NCBI NR]
  • pir||S37875 hypothetical protein YKL053w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|486072|emb|CAA81887.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • gi|433649|emb|CAA53424.1| B124 [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1587565|prf||2206495P ORF [NCBI NR]
  • Putative uncharacterized protein YKL053W OS=Saccharomyces cerevisiae GN=YKL053W PE=5 SV=1 [Swiss-Prot]
  • Questionable protein [mips]
  • [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1 [SGD]
  • YKL053W, Chr XI from 339214-339588 [yeast_orfs2]
  • Chr XI from 339214-339588 [yeastorf3.fasta]
  • Chr XI from 339213-339587 [yeastorf4.fasta]
  • (P35733) Hypothetical 14.7 kDa protein in NUP120-CSE4 intergenic region [4932.FASTACCERV.txt]
  • YKL053W SGDID:S0001536, Chr XI from 339217-339591, Dubious ORF [yeastflysequest.fasta]
  • B124 [Saccharomyces cerevisiae]gi|486072|emb|CAA81887.1| unnamed protein product [Saccharomyces cerevisiae]gi|539165|pir||S37875 hypothetical protein YKL053w - yeast (Saccharomyces cerevisiae)gi|549680|sp|P35733|YKF3_YEAST HYPOTHETICAL 14.7 KD PROTEIN [nrdb_11152004_Chlamydomonas]
  • YKL053W SGDID:S000001536, Chr XI from 339216-339590, Dubious ORF, "Hypothetical protein" [yeast-contam.fasta]
  • YKL053W SGDID:S000001536, Chr XI from 339216-339590, Dubious ORF, "Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • B124 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Hypothetical 14.7 kDa protein in NUP120-CSE4 intergenic region [nr-271106-contam.fasta]
  • ORF [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [YS9.fasta]
  • Putative uncharacterized protein YKL053W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL053W PE=5 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YKL053W SGDID:S000001536, Chr XI from 339572-339946, Genome Release 64-1-1, Dubious ORF, "Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1" [yeast-030211-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 124 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLSLYRRKN IAGPLPCVLI FITSKNCMYL FILSIRRKMN DGPRLWYFFR TLFFIGPFVV  60
   61 IIRLSLRVVV PLLQRRALYI IAVLIVVIAV VINMFFMSQL LPHFIGHNRR RYHAGTRPVL 120
  121 LLQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen UBC7 YKL053W 2 Unpublished Fields Lab Data
    View Screen MDM30 YKL053W 1 Unpublished Fields Lab Data
    View Screen CUS1 YKL053W 1 Unpublished Fields Lab Data
    View Screen INP54 YKL053W 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] deduced N/A Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle