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Protein Overview: ARP5

General Information:
Name(s) found: ARP5 / YNL059C [SGD]
Description(s) found:
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  • gi|994827|gb|AAA99652.1| Ynl2430p [NCBI NR]
  • gi|6324269|ref|NP_014339.1| Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes; Arp5p [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S58718 probable nuclear protein YNL059c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1730738|sp|P53946.1|ARP5_YEAST RecName: Full=Actin-related protein 5; AltName: Full=Actin-like protein ARP5 [NCBI NR]
  • gi|1301932|emb|CAA95933.1| ARP5 [Saccharomyces cerevisiae] [NCBI NR]
  • Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1 [Swiss-Prot]
  • ARP5 Actin-related protein [mips]
  • Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes [SGD]
  • ARP5, Chr XIV from 512664-514931, reverse complement [yeast_orfs2]
  • Chr XIV from 512664-514931, reverse complement [yeastorf3.fasta]
  • Chr XIV from 514931-512664, reverse complement [yeastorf5.fasta]
  • (P53946) Actin-like protein ARP5 [4932.FASTACCERV.txt]
  • ARP5 SGDID:S0005004, Chr XIV from 514933-512666, reverse complement, Verified ORF [yeastflysequest.fasta]
  • ARP5 SGDID:S0005004, Chr XIV from 514934-512667, reverse complement, Verified ORF [10112005cervSGD.fasta]
  • Actin-related protein, involved in the carboxypeptidase Y pathway [Saccharomyces cerevisiae]gi|1301932|emb|CAA95933.1| ARP5 [Saccharomyces cerevisiae]gi|1730738|sp|P53946|ARP5_YEAST Actin-like protein ARP5gi|2133044|pir||S58718 probable nuclear protein [nrdb_11152004_Chlamydomonas]
  • ARP5 SGDID:S000005004, Chr XIV from 514936-512669, reverse complement, Verified ORF, "Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • Ynl2430p [nr-271106-contam.fasta]
  • Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes; Arp5p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Actin-like protein ARP5 [nr-271106-contam.fasta]
  • ARP5 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • ARP5 SGDID:S000005004, Chr XIV from 514937-512670, reverse complement, Verified ORF, "Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes" [SGD_S-cerevisiae_na_01-05-2010_reversed.fasta]
  • [chemostatdb.fasta]
  • Actin-related protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARP5 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • ARP5 SGDID:S000005004, Chr XIV from 514935-512668, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes" [yeast-030211-contam.fasta]
  • ARP5 SGDID:S000005004, Chr XIV from 514935-512668, Genome Release 64-2-1, reverse complement, Verified ORF, "Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes; promotes nucleosome shifts in the 3 prime direction" [20141208_orf_trans.fasta]
  • YNL059C SGDID:S000005004, Chr XIV from 514935-512668, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 755 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][TASLink to PubMed article]
    Ino80 complex [IDALink to PubMed article][IMPLink to PubMed article][IPILink to PubMed article]
    Biological Process: chromatin remodeling [IMPLink to PubMed article][IPILink to PubMed articleLink to PubMed article]
    protein targeting to vacuole [IMPLink to PubMed article]
    Molecular Function: ATP-dependent 5'-3' DNA helicase activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRDASLTP LKAVVIDDPP LRQTPEPFDE QSAYNPQSPI AIDFGSSKLR AGFVNHATPT  60
   61 HIFPNALTKF RDRKLNKNFT FVGNDTLLDQ AVRSQSRSPF DGPFVTNWNL TEEILDYTFH 120
  121 HLGVVPDNGI PNPILLTERL ATVQSQRTNW YQILFETYNV PGVTFGIDSL FSFYNYNPSG 180
  181 NKTGLVISCG HEDTNVIPVV DGAGILTDAK RINWGGHQAV DYLNDLMALK YPYFPTKMSY 240
  241 LQYETMYKDY CYVSRNYDED IEKILTLENL DTNDVVVEAP FTEVLQPQKT EEELRIQAEK 300
  301 RKETGKRLQE QARLKRMEKL VQKQEEFEYF SKVRDQLIDE PKKKVLSVLQ NAGFDDERDF 360
  361 KKYLHSLEQS LKKAQMVEAE DDSHLDEMNE DKTAQKFDLL DIADEDLNED QIKEKRKQRF 420
  421 LKASQDARQK AKEEKERVAK EEEEKKLKEQ QWRETDLNGW IKDKRLKLNK LIKRRKEKLK 480
  481 LRDEMKDRKS QVSQNRMKNL ASLAEDNVKQ GAKRNRHQAT IDNDPNDTFG ANDEDWLIYT 540
  541 DITQNPEAFE EALEYEYKDI VELERLLLEH DPNFTEEDTL EAQYDWRNSI LHLFLRGPRP 600
  601 HDSENIHEQH QMHLNVERIR VPEVIFQPTM GGQDQAGICE LSETILLKKF GSQPGKLSQT 660
  661 SIDMVNNVLI TGGNAKVPGL KERIVKEFTG FLPTGTNITV NMSSDPSLDA WKGMAALARN 720
  721 EEQYRKTVIS KKEYEEYGPE YIKEHKLGNT KYFED

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) ARP4 ARP5 ARP8 IES1 IES3 INO80 NHP10 RVB1 RVB2
    View Details Krogan NJ, et al. (2006) ARP4 ARP5 ARP6 ARP8 CCA1 EAF1 EAF5 EAF6 EAF7 EPL1 ESA1 IES1 IES2 IES3 IES4 IES5 IES6 INO80 NHP10 NTO1 PIH1 RVB1 RVB2 SAS3 SWC3 SWC4 SWC5 SWC7 SWR1 TAH1 TRA1 VPS71 VPS72 YAF9 YNG2
    View Details Gavin AC, et al. (2006) ARP5 ARP8 IES1 IES3 IES5 INO80 NHP10
    View Details Qiu et al. (2008) ARP4 ARP5 IES3 INO80 RVB1 TAF14

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data ARP5 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 360.9897 Actin
    2 View Details [280..593] PSI-BLAST 4.221849 Heavy meromyosin subfragment
    3 View Details [594..755] MSA 18.121997 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle