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Protein Overview: YHR213W-B

General Information:
Name(s) found: YHR213W-B [SGD]
Description(s) found:
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  • gi|74622369|sp|Q8TGK1.1|YH21B_YEAST RecName: Full=Uncharacterized protein YHR213W-B [NCBI NR]
  • gi|33438811|ref|NP_878093.1| Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; Yhr213w-bp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|18767188|gb|AAL79309.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized protein YHR213W-B OS=Saccharomyces cerevisiae GN=YHR213W-B PE=2 SV=1 [Swiss-Prot]
  • Conserved hypothetical protein - identified by homology [mips]
  • Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [SGD]
  • Chr VIII from 540796-541095 [yeastorf5.fasta]
  • YHR213W-B SGDID:S0028652, Chr VIII from 540798-541097, Uncharacterized ORF [yeastflysequest.fasta]
  • YHR213W-B SGDID:S0028652, Chr VIII from 540799-541098, Uncharacterized ORF [10112005cervSGD.fasta]
  • Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [Saccharomyces cerevisiae]gi|18767188|gb|AAL79309.1| unknown [Saccharomyces cerevisiae] [nrdb_11152004_Chlamydomonas]
  • (Q8TGK1) Hypothetical protein YHR213W-B [cerv4932.FASTAC]
  • YHR213W-B SGDID:S000028652, Chr VIII from 540800-541099, Uncharacterized ORF, "Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YHR213W-B SGDID:S000028652, Chr VIII from 540800-541099, Uncharacterized ORF, "Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-contam.fasta]
  • Uncharacterized protein YHR213W-B [nr-271106-contam.fasta]
  • Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; Yhr213w-bp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unknown [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized protein YHR213W-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR213W-B PE=2 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YHR213W-B SGDID:S000028652, Chr VIII from 540800-541099, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-030211-contam.fasta]
  • YHR213W-B SGDID:S000028652, Chr VIII from 540800-541099, Genome Release 64-2-1, Uncharacterized ORF, "Pseudogenic fragment with similarity to flocculins; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; YHR213W-B has a paralog, YAR064W, that arose from a segmental duplication" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 99 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIDFCCSYI AGTHGRERAP SFTGTFVSHV SAENNCRPRR SEITQPCASG TEKKHFAATE  60
   61 KQCTNSLEGS RKDFLSLPLG HSYLFLFCFW RMICSEPKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle