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Protein Overview: gi|113578224, gi...

General Information:
Name(s) found: gi|115462147 [NCBI NR]
gi|113578224 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|115462147|ref|NP_001054673.1| Os05g0151400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113578224|dbj|BAF16587.1| Os05g0151400 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1306 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTTDADAA PVAPVLEEKP PTPPPDGDEV PSAPAAAAAA EQPKVVEEEE VRLEGKGGGF  60
   61 GGQEVEVAGD GEDGGEVEVA EAKDEGGGGE FAGGDAKAAS SLLAAAAEEE EEEEASNGEL 120
  121 GEEDAYPASS DAAVGEEKGE LGEEPEEKAP ALAPEANGAA ESDVEEKPEE DNEGEEVATG 180
  181 GGDDGELGME KEVDVSAGAA EAPQPEDKVA PEAEANGDLG DKAEEEASAS AAVEVVEESN 240
  241 APEELLEKAV VSEANGVAAA VELAVEEKLE DNKGEEEEME AKPEPVSGVI PVVVDDTSSE 300
  301 MIAPVSAESA VEESTEKEQT VDDTSSEMIA HVSAESAVEE STEKEQTVES EASESVEIVG 360
  361 VEKPTEDESN VDGGASSVVS RELAPEETKE NNVGQEDEGV AEVIDREEDA DDDEEIVLAA 420
  421 ADDEDDGTNE ADDDEDGVSS DRGPARVAII ESSEAAKQIM KELGEGSASV SPVSGLSSSR 480
  481 EYTNSMDGQI VLDDSEEDGD DDDNEDDDEK GFDSAALAAL LKAATGASAD GNVTVSSQDG 540
  541 SRIFSMDRPA GLGSSAPSLR PTVPRPVARS NLFSPSELAV TAEPTEEMTE EEKKLHDKVE 600
  601 LIRVKFLRLV YRLGATPEET VAAQVLYRLS LAEGIRHGRQ TNRAFSLDNA RKKAMLLEAE 660
  661 GKEELNFSCN ILVLGKIGVG KSATINSIFG EEKSKTDAFS SATNSVREIV GNVDGVQIRI 720
  721 IDTPGLRPNV MDQGSNRKIL ASVKKYTKRC PPDIVLYVDR LDSLSRDLND LPLLKTITSV 780
  781 LGSSIWFNAI VALTHAASAP PEGLNGAPMT YEVLMAQRSH IIQQSIRQAA GDMRLMNPVA 840
  841 LVENHPSCRR NREGQKVLPN GQSWRHQMLL LCYSSKILSE ANSLLKLQDP NPGKLFGFRF 900
  901 RSPPLPFLLS SLLQSRAHPK LSPDQGGNEG DSDIDLDDYS DIEQDEDEEE YDQLPPFKPL 960
  961 TKSQLARLTK EQKNAYFDEY DYRVKLLQKK QWKDEIRRLK EMKKRGKTDM DAYGYANIAG1020
 1021 ENDLDPPPEN VSVPLPDMVL PPSFDCDNPT YRYRFLEPTS TVLARPVLDA HGWDHDCGYD1080
 1081 GVSVEETLAL LNKFPANMAV QVTKDKKEFS IHLDSSISAK LGEDASSLAG FDIQTVGRQL1140
 1141 AYILRGETKF KNIKKNKTTG GFSVTFLGDI VATGLKVEDQ LSLGKRLALV ASTGAMRAQG1200
 1201 DTAYGANLEA RLKDKDYPIG QSLSTLGLSL MKWRRDLALG ANLQSQFSIG RGSKMVVRLG1260
 1261 LNNKLSGQIT VRTSTSEQVQ IALLGLIPVA ASIYRSFRPS EPSFAY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..419] PSI-BLAST 14.69897 Heavy meromyosin subfragment
    2 View Details [420..578] deduced N/A No confident structure predictions are available.
    3 View Details [579..954] PSI-BLAST 18.69897 Chloroplast protein translocon GTPase Toc34
    4 View Details [955..1034] deduced N/A No confident structure predictions are available.
    5 View Details [1035..1217] deduced N/A No confident structure predictions are available.
    6 View Details [1218..1306] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle