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Protein Overview: gi|108708066, gi...

General Information:
Name(s) found: gi|222624903 [NCBI NR]
gi|115452937 [NCBI NR]
gi|113548540 [NCBI NR]
gi|108708066 [NCBI NR]
Description(s) found:
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  • gi|222624903|gb|EEE59035.1| hypothetical protein OsJ_10788 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115452937|ref|NP_001050069.1| Os03g0341100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113548540|dbj|BAF11983.1| Os03g0341100 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108708066|gb|ABF95861.1| 60S ribosomal protein L18, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Os03g0341100 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • 60S ribosomal protein L18, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIDLVAGGR NKKTKRTAPK SDDVYLKLIV KLYRFLVRRT KSPFNAVILR RLFMSKTNRP  60
   61 PLSLRRLVRF MEGKENQIAV IVGTVTDDKR VYEVPAMKVA ALRFTETARA RIVNTGGECL 120
  121 TFDQLALRAP LGQNTVLLRG PKNAREAVKH FGPAPGVPHS NTKPYVRSKG RKFEKARGRR 180
  181 NSKGFKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 36.221849 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle