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Protein Overview: gi|125579559, gi...

General Information:
Name(s) found: gi|125579559 [NCBI NR]
gi|108862759 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|125579559|gb|EAZ20705.1| hypothetical protein OsJ_36325 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108862759|gb|ABA99308.2| Adaptor complexes medium subunit family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGGCSVRA IWILTPHDAV AFSRRFAVVE KRWRVAWEAE GGARAEMMPL PADYEVAAAF  60
   61 AERRRREGTA RGSGIRTSMS SAGSDSWVDD PITRHIISLH IDKEEGEGFM LWPVVLQKRG 120
  121 SYYILVLPLV DPQSFKAYES LLKRSDCGSS AKEKGNLSSI LLNLPCITGA LMVAHVIGDI 180
  181 ITGDTAEPEV IVSTGPSVGG LLDSLTGSIG ISARPKPIAA PVAAPTASIS SPVGAPQSES 240
  241 LKGGMRPFDK DLLRNFILGA MPFGTPQDLN YANVTSVRTT GFSADPLPTD QKQPAWKPYL 300
  301 YKGRQRTLFS SLETLNAALY DRDDVQDFLS VSGQVTCRAE LEGLPDVSLP LSGLKAARVE 360
  361 VSSFHHCVQA SEPTNDKQTL IFQPPLGNFV LMHYQASCNM DPPVKGFYQL SMVSENEGAF 420
  421 LFKLRLMEGY KSPFLMEFCM VTMPFPRRRV ASYDGNPSVG TVSMTEHSIE WRIVSSGRGL 480
  481 SGRSIEATFS GTVRFHPITI QRVNSSFRSV PSTAFVEDSD SEQDNTKNGA NLDDYLMEKM 540
  541 NKDLQAVNLE EPLSWQAYNY AKVSFKIVGG TLSGLTIDPK SVTIYPSVKA PVEYSMQASS 600
  601 GDYILWNTLG KCPSAALPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] deduced N/A No confident structure predictions are available.
    2 View Details [159..619] PSI-BLAST 118.0 AP1 clathrin adaptor core


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle