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Protein Overview: gi|116008110, gi...

General Information:
Name(s) found: gi|116008110 [NCBI NR]
gi|113194846 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|116008110|ref|NP_001036763.1| Darkener of apricot CG33553-PH, isoform H [Drosophila melanogaster] [NCBI NR]
  • gi|113194846|gb|ABI31212.1| CG33553-PH, isoform H [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 1704 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNELSELIA LGCPDLAAQK PQGGSTQVEL ILNTERRLSI KQMTATDLAT LRAAAAAEAE  60
   61 ARSRAQAEAE ALAIAQEQFR QAREAESKAR ARAALEVQAQ LQRVMESEKR RQQEEEERRI 120
  121 RQQAEEEQED DEDDDNDEEE ELTKGSLPTN SGPRERIASL PCNIDDAMEM HLLNVSQPKA 180
  181 SSKDDSPPKK STSHIADSIE LLRMQRAARD ARSHNRSRER SISPDRNRER SAAPDRLQSS 240
  241 ASMSSLDSAS ASASRQPSKA GSRRGSTTSA TGVEPPLMAA PPQPTKFPLT KTVSAPNMDR 300
  301 RRSSLTSLFP GPSPLVAPEP SLHTNPDPRV QEQIEEDRRR RRMDDGYREI PSGKMVHRTK 360
  361 TPPPVGTNLG VSLKRVTAPS GSITIKPKES PMLGVVLRRV EKKTVPQKSI LDDDKPLYHF 420
  421 SIVRSDHKEH VPAQKPKPKP APPAAKPSPG GILTGPQVIR NAPKQPVPVK PQRPMPGVPI 480
  481 TITKIEGDKI IIIKKIIVPK NSKIPEQYLQ MSEDAGKPAN TVPSAVSSSA APSPSLRTKE 540
  541 ESQPAMQKPT PPPASGQQFF QVVSPQFASV LSSSIPESKC AVRSPISSPL AIRKSRPPLL 600
  601 PSSPKSTPPL PRKHHPLAYN AATGTISSAS GAALPSRLMA TIASSPASSI SLSSCSSPSS 660
  661 SPPPPVPCRA PKNASRPVAV TAAPPPSTSN EISLDKLLQQ QQELEEKSAA ATNSAKMDAN 720
  721 FYDAEIEMMN KYLKSLPDYS ELDRKLHQEF QECEDLYDKI KRQQQPLAKS NSQQSVTKAV 780
  781 GPGVPAISSG LSKSSSINFA QNPSSRGAAP RLAYPSIFSQ AAGEPKLQRS ISSSNMPISA 840
  841 PNSMRPLPTK NGLQSGSNLS LNKQLMNEFW SENLTSSQKR QTPKRTFWNY EKICGAQLGD 900
  901 AGQPFKVDAK TAKKLAIFDP TVAEAAQKEL QRPQQSQVPQ NQPHKLQKNA SLSHLDLKVR 960
  961 QAVTKDDLYK LICNEQSPLA GSNFVSRVPV KQQFPAQQQQ VLPKSMSMTH VPGGGQPMGA1020
 1021 PLLRTSSRTH IPSYMKNLPS LSRSTSNSAI LMTQPRKEPP PKEPLKAPAP LPAIAAPTVG1080
 1081 KPSGVLKSSS SSCVPSPRCA AAFFRRPQEA NNPQQQHHQP LQKPQQVAPI EESGPGDSAS1140
 1141 LERKSEKSNS TLSTSSFTVT NCCTTHLPQL SKFTSSFHIA PTTATTTAAT ATPTPTGAAT1200
 1201 TSDQQQQSGG TPAMVAANLE VPTSSSSSAA TKRQKDVDNK LEKCLNDMLK LKTSSNNNST1260
 1261 SNSNNNAIMS HSLTGEHKDP KTALEGPTSS SSSSSSKYIG ESQIPVPVQL YDPQKPLLQQ1320
 1321 QQQQQRICYP IGKSNSTSQL PMGGYQRLLQ HQQQQHHQQQ QQQHQEQQQY PQHKRPFLNW1380
 1381 NSFACSAMNG ASDPFMQQQH MPAHQQQQHL PHKLQQSYSS SHVPKQAPKS GLAMFLQKNT1440
 1441 NKENKFGQPM QQQPPGMMPQ MYGYQAPQQQ SKIGYPRTGA PLTHSASFSS AQRPTALQFH1500
 1501 QQHQQQQHLQ QQQQHPQQQQ HQHSSFGVGM MSRNYYNMPK QPERKPLQTF DPYAYPKPNQ1560
 1561 MQPVKYQQQQ QHPHTQFQNA SAGGGGGGAA GLQYDPNTNT QLFYASPASS SSNKQPQQPQ1620
 1621 QQQQQQQSQL QQSNSVIFNH SGQQHQPHQQ QQNEMSKSAL GLHFIEVDSI PPIYFCLVFV1680
 1681 LHMCLNQKCP LTTRCRFQRK FAPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 38.09691 Heavy meromyosin subfragment
    2 View Details [327..469] PSI-BLAST 12.69897 No description for 2i1jA was found.
    3 View Details [470..604] PSI-BLAST 8.69897 Solution structure of the first SH3 domain of human intersectin2 (KIAA1256)
    4 View Details [605..720] deduced N/A No confident structure predictions are available.
    5 View Details [721..781] deduced N/A No confident structure predictions are available.
    6 View Details [782..837] deduced N/A No confident structure predictions are available.
    7 View Details [838..1059] deduced N/A No confident structure predictions are available.
    8 View Details [1060..1290] deduced N/A No confident structure predictions are available.
    9 View Details [1291..1479] deduced N/A No confident structure predictions are available.
    10 View Details [1480..1556] deduced N/A No confident structure predictions are available.
    11 View Details [1557..1614] deduced N/A No confident structure predictions are available.
    12 View Details [1615..1704] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.375837873453985 bayes_pls_golite062009
  • protein binding
    		•  0.25580402341401 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.
    10 No functions predicted.
    11 No functions predicted.
    12 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.58

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle