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Protein Overview: gi|15829960, gi|...

General Information:
Name(s) found: gi|15829960 [NCBI NR]
gi|13360164 [NCBI NR]
Description(s) found:
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  • gi|15829960|ref|NP_308733.1| transcriptional repressor of N-acetylglucosamine operon [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
  • gi|13360164|dbj|BAB34129.1| transcriptional repressor of nag (N-acetylglucosamine) operon [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
  • transcriptional repressor of N-acetylglucosamine operon [Escherichia coli O157:H7 str. Sakai] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • transcriptional repressor of nag (N-acetylglucosamine) operon [Escherichia coli O157:H7 str. Sakai] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
    • Organism: Escherichia coli O157:H7 str. Sakai
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPGGQAQIG NVDLVKQLNS AAVYRLIDQY GPISRIQIAE QSQLAPASVT KITRQLIERG  60
   61 LIKEVDQQAS TGGRRAISIV TETRNFHAIG VRLGRHDATI TLFDLSSKVL AEEHYPLPER 120
  121 TQQTLEHALL NAIAQFIDSY QRKLRELIAI SVILPGLVDP DSGKIHYMPH IQVENWGLVE 180
  181 ALEERFKVTC FVGHDIRSLA LAEHYFGASQ DCEDSILVRV HRGTGAGIIS NGRIFIGRNG 240
  241 NVGEIGHIQV EPLGERCHCG NFGCLETIAA NAAIEQRVLN LLKQGYQSRV PLDDCTIKTI 300
  301 CKAANKGDSL ASEVIEYVGR HLGKTIAIAI NLFNPQKIVI AGEITEADKV LLPAIESCIN 360
  361 TQALKAFRTN LPVVRSELDH RSAIGAFALV KRAMLNGILL QHLLEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 85.045757 Crystal structure of the ROK family transcriptional regulator, homolog of E.coli MLC protein.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbohydrate kinase activity
    		•  0.7849166795124 bayes_pls_golite062009
  • binding
    		•  0.778934303209369 bayes_pls_golite062009
  • catalytic activity
    		•  0.666924658593345 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.53285802828572 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.527726744596866 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.513853050429619 bayes_pls_golite062009
  • hexokinase activity
    		•  0.32024736915472 bayes_pls_golite062009
  • protein binding
    		•  0.238186535482463 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.226676176856305 bayes_pls_golite062009
  • DNA binding
    		•  0.0378796029809374 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle