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Protein Overview: gi|110641905, gi...

General Information:
Name(s) found: gi|110641905 [NCBI NR]
gi|110343497 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|110641905|ref|YP_669635.1| hypothetical protein ECP_1731 [Escherichia coli 536] [NCBI NR]
  • gi|110343497|gb|ABG69734.1| hypothetical protein YeaG (putative serine kinases) [Escherichia coli 536] [NCBI NR]
    • Organism: Escherichia coli 536
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIFDHYRQR YEAAKDEEFT LQEFLTTCRQ DRSAYANAAE RLLMAIGEPV MVDTAQEPRL  60
   61 SRLFSNRVIA RYPAFEEFYG MEDAIEQIVS YLKHAAQGLE EKKQILYLLG PVGGGKSSLA 120
  121 ERLKSLMQLV PIYVLSANGE RSPVNDHPFC LFNPQEDAQI LEKEYGIPRR YLGTIMSPWA 180
  181 AKRLHEFGGD ITKFRVVKVW PSILQQIAIA KTEPGDENNQ DISALVGKVD IRKLEHYAQN 240
  241 DPDAYGYSGA LCRANQGIME FVEMFKAPIK VLHPLLTATQ EGNYNGTEGI SALPFNGIIL 300
  301 AHSNESEWVT FRNNKNNEAF LDRVYIVKVP YCLRISEEIK IYEKLLNHSE LTHAPCAPGT 360
  361 LETLSRFSIL SRLKEPENSS IYSKMRVYDG ESLKDTDPKA KSYQEYRDYA GVDEGMNGLS 420
  421 TRFAFKILSR VFNFDHVEVA ANPVHLFYVL EQQIEREQFP QEQAERYLEF LKGYLIPKYA 480
  481 EFIGKEIQTA YLESYSEYGQ NIFDRYVTYA DFWIQDQEYR DPDTGQLFDR ESLNAELEKI 540
  541 EKPAGISNPK DFRNEIVNFV LRARANNSGR NPNWTSYEKL RTVIEKKMFS NTEELLPVIS 600
  601 FNAKTSTDEQ KKHDDFVDRM MEKGYTRKQV RLLCEWYLRV RKSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] PSI-BLAST 4.0 VCP/p97
    2 View Details [175..481] PSI-BLAST 54.39794 Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding
    3 View Details [482..644] Pfam 67.102373 No description for PF06798.3 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle