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Protein Overview: gi|229904583, gi...

General Information:
Name(s) found: gi|229904583 [NCBI NR]
gi|229678701 [NCBI NR]
gi|108814049 [NCBI NR]
gi|108777697 [NCBI NR]
Description(s) found:
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  • gi|229904583|ref|ZP_04519694.1| predicted phosphoribulokinase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|229678701|gb|EEO74806.1| predicted phosphoribulokinase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108814049|ref|YP_649816.1| phosphoribulokinase 1 [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108777697|gb|ABG20216.1| phosphoribulokinase 1 [Yersinia pestis Nepal516] [NCBI NR]
  • phosphoribulokinase 1 [Yersinia pestis Nepal516] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis Nepal516
    Length: 289 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKHPVIAV TGSSGAGTTT TSLAFRKIFQ QLDIRAAQIE GDSFHRYTRP EMDAAIRKAR  60
   61 DQGRHISYFG PEANDFGQLE QSVAEYSKHG TGRSRKYLHT YDEAVPYNQI PGTFTPWEPL 120
  121 PEPTDVLFYE GLHGGVVTEH HDVAKHVDLL VGVVPIVNLE WIQKLVRDTG ERGHSREAVM 180
  181 DSVVRSMDDY INYITPQFSR THINFQRVPT VDTSNPFAAK AIPSLDESFV VIHFRGLDHI 240
  241 DFPYLLAMLQ GSFISNINTL VVPGGKMGLA MELIMAPLVQ QLLEGKQIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] PSI-BLAST 68.30103 PHOSPHORIBULOKINASE FROM RHODOBACTER SPHEROIDES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009
  • hydrolase activity
    		•  0.310795123901245 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle