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Protein Overview: gi|108777307, gi...

General Information:
Name(s) found: gi|229904155 [NCBI NR]
gi|229678273 [NCBI NR]
gi|108813659 [NCBI NR]
gi|108777307 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|229904155|ref|ZP_04519266.1| putative modulator of DNA gyrase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|229678273|gb|EEO74378.1| putative modulator of DNA gyrase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108813659|ref|YP_649426.1| protease TldD [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108777307|gb|ABG19826.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 [Yersinia pestis Nepal516] [NCBI NR]
    • Organism: Yersinia pestis Nepal516
    Length: 481 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSFVSEQL LTANKLNHQD LFSVLGQLTE RRLDYADLYF QSSYHEAWVL EDSIIKDGSY  60
   61 NIDQGVGVRA VSGEKTGFAY ADQITLNALQ QSAHAARSIV RDTGNGKVHT LGEIAYQALY 120
  121 PLLDPLQSLS REDKIALLHR VDKVARAADK RVQEVSASLT GVYEQILVAA TDGTLAADVR 180
  181 PLVRLSVSVL VEDNGKRERG ACGGGGRFGY DYFLETVDGE VRADNFANEA VRMALVNLSA 240
  241 IAAPAGAMPV VLGAGWPGVL LHEAVGHGLE GDFNRRGSSV FSGQMGKLVA SELCTVVDDG 300
  301 TMQGRRGSLA IDDEGVPGQY NVLIENGILK GYMQDKLNAR LMGVAPTGNG RRESYAHLPM 360
  361 PRMTNTYMLA GQSTPEDIIA SVEYGLYAPN FGGGQVDITS GKFVFSTSEA YLIEKGKITH 420
  421 AVKGATLIGS GIEAMQQISM VGNDLALDKG VGVCGKEGQS LPVGVGQPTL KLDNLTVGGT 480
  481 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..481] PSI-BLAST 88.0 Crystal structure of PMBA-related protein (TM0727) from Thermotoga maritima at 1.95 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  0.844669254385544 bayes_pls_golite062009
  • catalytic activity
    		•  0.55839241827268 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.0121152486203551 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle