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Protein Overview: gi|108809728, gi...

General Information:
Name(s) found: gi|108809728 [NCBI NR]
gi|108781641 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|108809728|ref|YP_653644.1| protease [Yersinia pestis Antiqua] [NCBI NR]
  • gi|108781641|gb|ABG15699.1| protease [Yersinia pestis Antiqua] [NCBI NR]
    • Organism: Yersinia pestis Antiqua
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTSLLLSA LAISVGLGLA SVPMVSAAAL PAAVAGQTLP SLAPMLEKVL PAVVSVHVSG  60
   61 SQAQQQRLPE EFKFFFGPNA PSGKESSRPF EGLGSGVIIN AEKGYILTNN HVINNADKIR 120
  121 VQLNDGREYD AKLLGRDEQT DIALLQLTDA KNLTAIKIAD SDNLRVGDFA VAVGNPFGLG 180
  181 QTATSGIISA LGRSGLNLEG LENFIQTDAS INRGNSGGAL VNLDGELIGI NTAILAPGGG 240
  241 NIGIGFAIPS NMAQNLSQQL IEFGEVKRGL LGIRGSEMTA DIAKAFNIDA QRGAFVSEVL 300
  301 PKSAAAKAGI KPGDVLISVD GKKISSFAEL RAKVGTTGPG KTIKIGLLRE GKPLEVSVTL 360
  361 DNSSSTSTSA ENLSPSLQGA SLSNGELKDG SKGIKVDSVT KGSPAAQSGL QKDDVIIAVN 420
  421 RERVKDIAEL RKAIEAKPAV IALNIVRGED NIYLLIR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..457] PSI-BLAST 80.0 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  5.28251016030465 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.93232564230667 bayes_pls_golite062009
  • endopeptidase activity
    		•  4.76863192965644 bayes_pls_golite062009
  • hydrolase activity
    		•  4.7420645083083 bayes_pls_golite062009
  • serine hydrolase activity
    		•  3.40985043278892 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  3.40724860044542 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  3.13486560415684 bayes_pls_golite062009
  • catalytic activity
    		•  1.40927913545237 bayes_pls_golite062009
  • protein binding
    		•  0.0013332686405948 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle