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Protein Overview: DXR_ORYSA

General Information:
Name(s) found: DXR_ORYSA [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice) [Swiss-Prot]
    • Organism: Oryza sativa
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKVVSFPG DLAAVSFLDS NRGGAFNQLK VDLPFQTRDR RAVSLRRTCC SMQQAPPPAW  60
   61 PGRAVVEPGR RSWDGPKPIS IVGSTGSIGT QTLDIVAENP DKFRVVALAA GSNVTLLADQ 120
  121 VKTFKPKLVA VRNESLVDEL KEALADCDWK PEIIPGEQGV IEVARHPDAV TVVTGIVGCA 180
  181 GLKPTVAAIE AGKDIALANK ETLIAGGPFV LPLAQKHKVK ILPADSEHSA IFQCIQGLPE 240
  241 GALRRIILTA SGGAFRDWPV DKLKEVKVAD ALKHPNWNMG KKITVDSATL FNKGLEVIEA 300
  301 HYLFGAEYDD IEIVIHPQSI IHSMIETQDS SVLAQLGWPD MRIPILYTMS WPDRIYCSEV 360
  361 TWPRLDLCKL GSLTFKAPDN VKYPSMDLAY AAGRAGGTMT GVLSAANEKA VELFIDEKIG 420
  421 YLDIFKVVEL TCDAHRNELV TRPSLEEIIH YDLWAREYAA SLQPSTGLSP VPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] PSI-BLAST 6.045757 Glucose-fructose oxidoreductase, N-terminal domain; Glucose-fructose oxidoreductase
    2 View Details [75..473] PSI-BLAST 133.0 No description for 2eghA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
    		•  3.73695658845135 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.60548927745815 bayes_pls_golite062009
  • catalytic activity
    		•  2.54843319568228 bayes_pls_golite062009
  • glyceraldehyde-3-phosphate dehydrogenase activity
    		•  2.42852631499395 bayes_pls_golite062009
  • glucose-6-phosphate dehydrogenase activity
    		•  2.40527964325542 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  1.41676087939212 bayes_pls_golite062009
  • glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity
    		•  1.08771562641109 bayes_pls_golite062009
  • retinol dehydrogenase activity
    		•  1.07588236908906 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  0.841370849960815 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle