YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|109072241

General Information:
Name(s) found: gi|109072241 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|109072241|ref|XP_001092234.1| PREDICTED: SEC63-like protein isoform 4 [Macaca mulatta] [NCBI NR]
    • Organism: Macaca mulatta
    Length: 760 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQN AEQIRLKNIR KVYGRCMWYR  60
   61 LRLLKPQPNI IPTVKKIVLL AGWALFLFLA YKVSKTDREY QEYNPYEVLN LDPGATVAEI 120
  121 KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA ALTDEESRKN WEEFGNPDGP QATSFGIALP 180
  181 AWIVDQKNSI LVLLVYGLAF MVILPVVVGS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN 240
  241 MDMKRLIMVL AGASEFDPQY NKDATSRPTD NILIPQLIRE IGSINLKKNE PPLTCPYSLK 300
  301 ARVLLLSHLA RMKIPETLEE DQQFMLKKCP ALLQEMVNVI CQLIVMARNR EEREFRAPTL 360
  361 ASLENCMKLS QMAVQGLQQF KSPLLQLPHI EEDNLRRVSN HKKYKIKTIQ DLVSLKESDR 420
  421 HTLLHFLEDE KYEEVMAVLG SFPYVTMDIK SQVLDDEDSN NITVGSLVTV LVKLTRQTMA 480
  481 EVFEKEQSIC AAEEQPAEDG QGETNKNRTK GGWQQKSKGP KKTAKSKKKK PLKKKPTPVL 540
  541 LPQSKQQKQK QANGVVGNEA AVKEDEEEVS DKGSDSEEEE TNRDSQSEKD DGSDRDSDRE 600
  601 QDEKQNKDDE AEWQELQQSI QRKERALLET KSKITHPVYS LYFPEEKQEW WWLYIADRKE 660
  661 QTLISMPYHV CTLKDTEEVE LKFPAPGKPG NYQYTVFLRS DSYMGLDQIK PLKLEVHEAK 720
  721 PVPENHPQWD TAIEGDEDQE DSEGFEDSFE EEEEEEEDDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..219] PSI-BLAST 20.30103 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [220..497] PSI-BLAST 56.69897 No description for 2q0zX was found.
    4 View Details [498..760] FFAS03 3.12 No description for 2q0zX was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • signal recognition particle binding
    		•  4.18753628587547 bayes_pls_golite062009
  • ribonucleoprotein binding
    		•  2.20695097776982 bayes_pls_golite062009
  • protein binding
    		•  2.0077819170005 bayes_pls_golite062009
  • binding
    		•  1.75184008862922 bayes_pls_golite062009
  • transporter activity
    		•  1.29863098651348 bayes_pls_golite062009
  • protein transporter activity
    		•  0.939490372372376 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.91241047562027 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.812144232432417 bayes_pls_golite062009
  • heat shock protein binding
    		•  0.796066295738949 bayes_pls_golite062009
    3
    Term Confidence Notes
  • ATPase activity, coupled
    		•  2.2162185402774 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.00003070639929 bayes_pls_golite062009
  • ATPase activity
    		•  1.94063929259701 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.93031967085303 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.91231918357992 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.90999409453671 bayes_pls_golite062009
  • binding
    		•  1.0900341502935 bayes_pls_golite062009
  • hydrolase activity
    		•  0.863470202460548 bayes_pls_golite062009
  • protein binding
    		•  0.843450745288021 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  0.223800319644873 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  0.223800319644873 bayes_pls_golite062009
  • catalytic activity
    		•  0.197884933993864 bayes_pls_golite062009
  • helicase activity
    		•  0.166899434976303 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
    		•  0.0561411188724552 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  0.0447036496272264 bayes_pls_golite062009
    4
    Term Confidence Notes
  • ligand-gated channel activity
    		•  3.84815857667697 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  3.84815857667697 bayes_pls_golite062009
  • transporter activity
    		•  2.35657262831396 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.25147059981728 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.22751878261824 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.14804562881998 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.08500207462933 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.02275538762334 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.98975215032128 bayes_pls_golite062009
  • channel activity
    		•  1.98765540246813 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.98765540246813 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  1.95683546055804 bayes_pls_golite062009
  • cation channel activity
    		•  1.93647351989637 bayes_pls_golite062009
  • potassium channel activity
    		•  1.90735237063729 bayes_pls_golite062009
  • ion channel activity
    		•  1.90734204729298 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  1.89680019328623 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  1.89163382477908 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  1.87377069780892 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.86336507935542 bayes_pls_golite062009
  • gated channel activity
    		•  1.80923664525859 bayes_pls_golite062009
  • protein binding
    		•  1.79910124244332 bayes_pls_golite062009
  • binding
    		•  1.71108326129383 bayes_pls_golite062009
  • inward rectifier potassium channel activity
    		•  1.30492997253657 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.405921935455161 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle